AUTHORS.md
LICENSE
README.md
setup.py
Pharokka.egg-info/PKG-INFO
Pharokka.egg-info/SOURCES.txt
Pharokka.egg-info/dependency_links.txt
Pharokka.egg-info/requires.txt
Pharokka.egg-info/top_level.txt
bin/.DS_Store
bin/citation.py
bin/create_custom_hmm.py
bin/custom_db.py
bin/databases.py
bin/external_tools.py
bin/hmm.py
bin/input_commands.py
bin/install_databases.py
bin/pharokka.py
bin/pharokka_plotter.py
bin/pharokka_proteins.py
bin/plot.py
bin/post_processing.py
bin/processes.py
bin/proteins.py
bin/util.py
bin/version.py
bin/__pycache__/input_commands.cpython-310.pyc
bin/__pycache__/processes.cpython-310.pyc
bin/__pycache__/util.cpython-310.pyc
tests/__init__.py
tests/test_external_commands.py
tests/test_input_commands.py
tests/test_overall.py
tests/test_proteins.py