.bumpversion.cfg
.coveragerc
AUTHORS.rst
CHANGELOG.rst
CODE_OF_CONDUCT.rst
LICENSE
LICENSE.LESSER
MANIFEST.in
README.rst
lint-requirements.txt
pretest-requirements.txt
pyproject.toml
requirements.txt
setup.cfg
setup.py
test-requirements.txt
tox.ini
docs/NONMEM.rst
docs/Pharmpy_logo.svg
docs/Pharmpy_logo_dark.svg
docs/allometry.rst
docs/amd.rst
docs/api.rst
docs/api_model.rst
docs/api_modeling.rst
docs/api_tools.rst
docs/api_workflows.rst
docs/bootstrap.rst
docs/cdd.rst
docs/changelog.rst
docs/citation.rst
docs/cli.rst
docs/code_of_conduct.rst
docs/common_features.rst
docs/conf.py
docs/configuration.rst
docs/contribute.rst
docs/contributors.rst
docs/covsearch.rst
docs/crossval.rst
docs/custom.css
docs/data.rst
docs/design.rst
docs/developers.rst
docs/drug_metabolite.rst
docs/estmethod.rst
docs/frem.rst
docs/general.rst
docs/getting_started.rst
docs/help_functions.py
docs/iivsearch.rst
docs/index.rst
docs/iovsearch.rst
docs/license.rst
docs/linearize.rst
docs/mfl.rst
docs/model.rst
docs/modelfit.rst
docs/modeling.rst
docs/modelsearch.rst
docs/nonmem_plugin.rst
docs/pharmr_logo.svg
docs/pkpd.rst
docs/plots.rst
docs/plugins.rst
docs/projects.rst
docs/psn_resmod.rst
docs/psn_tools.rst
docs/qa.rst
docs/requirements.txt
docs/retries.rst
docs/ruvsearch.rst
docs/scm.rst
docs/simeval.rst
docs/spelling_wordlist.txt
docs/strictness.rst
docs/structsearch.rst
docs/tmdd.rst
docs/tools.rst
docs/user_guide.rst
docs/using_r.rst
docs/_ext/conversion.py
docs/_ext/pharmpy_snippet.py
docs/images/Pharmpy_symbol.svg
docs/images/model.svg
docs/images/tools.svg
src/conftest.py
src/pharmpy/__init__.py
src/pharmpy/__main__.py
src/pharmpy/cli.py
src/pharmpy/config.py
src/pharmpy/visualization.py
src/pharmpy/deps/__init__.py
src/pharmpy/deps/altair.py
src/pharmpy/deps/rich.py
src/pharmpy/deps/scipy.py
src/pharmpy/deps/sympy_printing.py
src/pharmpy/internals/__init__.py
src/pharmpy/internals/code_generator.py
src/pharmpy/internals/df.py
src/pharmpy/internals/immutable.py
src/pharmpy/internals/math.py
src/pharmpy/internals/unicode.py
src/pharmpy/internals/ds/__init__.py
src/pharmpy/internals/ds/ordered_set.py
src/pharmpy/internals/expr/__init__.py
src/pharmpy/internals/expr/assumptions.py
src/pharmpy/internals/expr/eval.py
src/pharmpy/internals/expr/funcs.py
src/pharmpy/internals/expr/leaves.py
src/pharmpy/internals/expr/matrix.py
src/pharmpy/internals/expr/ode.py
src/pharmpy/internals/expr/parse.py
src/pharmpy/internals/expr/subs.py
src/pharmpy/internals/expr/tree.py
src/pharmpy/internals/expr/units.py
src/pharmpy/internals/fn/__init__.py
src/pharmpy/internals/fn/signature.py
src/pharmpy/internals/fn/type.py
src/pharmpy/internals/fs/__init__.py
src/pharmpy/internals/fs/cwd.py
src/pharmpy/internals/fs/lock.py
src/pharmpy/internals/fs/path.py
src/pharmpy/internals/fs/symlink.py
src/pharmpy/internals/fs/tmp.py
src/pharmpy/internals/graph/directed/__init__.py
src/pharmpy/internals/graph/directed/connected_components.py
src/pharmpy/internals/graph/directed/inverse.py
src/pharmpy/internals/graph/directed/reachability.py
src/pharmpy/internals/module/__init__.py
src/pharmpy/internals/module/lazy.py
src/pharmpy/internals/parse/__init__.py
src/pharmpy/internals/parse/generic.py
src/pharmpy/internals/parse/ignored.py
src/pharmpy/internals/parse/missing.py
src/pharmpy/internals/parse/prettyprint.py
src/pharmpy/internals/parse/tree.py
src/pharmpy/internals/parse/treeprint.py
src/pharmpy/internals/sequence/__init__.py
src/pharmpy/internals/sequence/lcs.py
src/pharmpy/internals/set/partitions.py
src/pharmpy/internals/set/subsets.py
src/pharmpy/model/__init__.py
src/pharmpy/model/data.py
src/pharmpy/model/datainfo.py
src/pharmpy/model/estimation.py
src/pharmpy/model/model.py
src/pharmpy/model/parameters.py
src/pharmpy/model/random_variables.py
src/pharmpy/model/statements.py
src/pharmpy/model/distributions/__init__.py
src/pharmpy/model/distributions/numeric.py
src/pharmpy/model/distributions/symbolic.py
src/pharmpy/model/external/__init__.py
src/pharmpy/model/external/utils.py
src/pharmpy/model/external/fcon/__init__.py
src/pharmpy/model/external/fcon/model.py
src/pharmpy/model/external/generic/__init__.py
src/pharmpy/model/external/generic/generic.py
src/pharmpy/model/external/nlmixr/__init__.py
src/pharmpy/model/external/nlmixr/error_model.py
src/pharmpy/model/external/nlmixr/ini.py
src/pharmpy/model/external/nlmixr/model.py
src/pharmpy/model/external/nlmixr/model_block.py
src/pharmpy/model/external/nlmixr/name_mangle.py
src/pharmpy/model/external/nlmixr/sanity_checks.py
src/pharmpy/model/external/nonmem/__init__.py
src/pharmpy/model/external/nonmem/advan.py
src/pharmpy/model/external/nonmem/dataset.py
src/pharmpy/model/external/nonmem/detect.py
src/pharmpy/model/external/nonmem/model.py
src/pharmpy/model/external/nonmem/nmtran_parser.py
src/pharmpy/model/external/nonmem/parsing.py
src/pharmpy/model/external/nonmem/table.py
src/pharmpy/model/external/nonmem/update.py
src/pharmpy/model/external/nonmem/records/__init__.py
src/pharmpy/model/external/nonmem/records/abbreviated_record.py
src/pharmpy/model/external/nonmem/records/code_record.py
src/pharmpy/model/external/nonmem/records/data_record.py
src/pharmpy/model/external/nonmem/records/estimation_record.py
src/pharmpy/model/external/nonmem/records/etas_record.py
src/pharmpy/model/external/nonmem/records/factory.py
src/pharmpy/model/external/nonmem/records/model_record.py
src/pharmpy/model/external/nonmem/records/omega_record.py
src/pharmpy/model/external/nonmem/records/option_record.py
src/pharmpy/model/external/nonmem/records/parsers.py
src/pharmpy/model/external/nonmem/records/problem_record.py
src/pharmpy/model/external/nonmem/records/raw_record.py
src/pharmpy/model/external/nonmem/records/record.py
src/pharmpy/model/external/nonmem/records/simulation_record.py
src/pharmpy/model/external/nonmem/records/sizes_record.py
src/pharmpy/model/external/nonmem/records/subroutine_record.py
src/pharmpy/model/external/nonmem/records/table_record.py
src/pharmpy/model/external/nonmem/records/theta_record.py
src/pharmpy/model/external/nonmem/records/grammars/abbreviated_record.lark
src/pharmpy/model/external/nonmem/records/grammars/code_record.lark
src/pharmpy/model/external/nonmem/records/grammars/data_record.lark
src/pharmpy/model/external/nonmem/records/grammars/definitions.lark
src/pharmpy/model/external/nonmem/records/grammars/omega_record.lark
src/pharmpy/model/external/nonmem/records/grammars/option_record.lark
src/pharmpy/model/external/nonmem/records/grammars/problem_record.lark
src/pharmpy/model/external/nonmem/records/grammars/simulation_record.lark
src/pharmpy/model/external/nonmem/records/grammars/theta_record.lark
src/pharmpy/model/external/rxode/__init__.py
src/pharmpy/model/external/rxode/model.py
src/pharmpy/modeling/__init__.py
src/pharmpy/modeling/allometry.py
src/pharmpy/modeling/basic_models.py
src/pharmpy/modeling/blq.py
src/pharmpy/modeling/common.py
src/pharmpy/modeling/compartments.py
src/pharmpy/modeling/covariate_effect.py
src/pharmpy/modeling/data.py
src/pharmpy/modeling/error.py
src/pharmpy/modeling/estimation.py
src/pharmpy/modeling/estimation_steps.py
src/pharmpy/modeling/evaluation.py
src/pharmpy/modeling/expressions.py
src/pharmpy/modeling/help_functions.py
src/pharmpy/modeling/iterators.py
src/pharmpy/modeling/lrt.py
src/pharmpy/modeling/math.py
src/pharmpy/modeling/metabolite.py
src/pharmpy/modeling/odes.py
src/pharmpy/modeling/parameter_sampling.py
src/pharmpy/modeling/parameter_variability.py
src/pharmpy/modeling/parameters.py
src/pharmpy/modeling/pd.py
src/pharmpy/modeling/plots.py
src/pharmpy/modeling/random_variables.py
src/pharmpy/modeling/results.py
src/pharmpy/modeling/tmdd.py
src/pharmpy/modeling/units.py
src/pharmpy/modeling/write_csv.py
src/pharmpy/modeling/example_models/moxo.csv
src/pharmpy/modeling/example_models/moxo.mod
src/pharmpy/modeling/example_models/pheno.cov
src/pharmpy/modeling/example_models/pheno.datainfo
src/pharmpy/modeling/example_models/pheno.dta
src/pharmpy/modeling/example_models/pheno.ext
src/pharmpy/modeling/example_models/pheno.lst
src/pharmpy/modeling/example_models/pheno.mod
src/pharmpy/modeling/example_models/pheno.phi
src/pharmpy/modeling/example_models/pheno.tab
src/pharmpy/modeling/example_models/pheno_linear.dta
src/pharmpy/modeling/example_models/pheno_linear.ext
src/pharmpy/modeling/example_models/pheno_linear.lst
src/pharmpy/modeling/example_models/pheno_linear.mod
src/pharmpy/modeling/example_models/pheno_linear.phi
src/pharmpy/reporting/__init__.py
src/pharmpy/reporting/altairplot.py
src/pharmpy/reporting/conf.py
src/pharmpy/reporting/custom.css
src/pharmpy/reporting/reporting.py
src/pharmpy/tools/__init__.py
src/pharmpy/tools/common.py
src/pharmpy/tools/psn_helpers.py
src/pharmpy/tools/rankfuncs.py
src/pharmpy/tools/reporting.py
src/pharmpy/tools/run.py
src/pharmpy/tools/wrap.py
src/pharmpy/tools/allometry/__init__.py
src/pharmpy/tools/allometry/tool.py
src/pharmpy/tools/amd/__init__.py
src/pharmpy/tools/amd/report.rst
src/pharmpy/tools/amd/results.py
src/pharmpy/tools/amd/run.py
src/pharmpy/tools/bootstrap/__init__.py
src/pharmpy/tools/bootstrap/report.rst
src/pharmpy/tools/bootstrap/results.py
src/pharmpy/tools/bootstrap/tool.py
src/pharmpy/tools/cdd/__init__.py
src/pharmpy/tools/cdd/results.py
src/pharmpy/tools/covsearch/__init__.py
src/pharmpy/tools/covsearch/results.py
src/pharmpy/tools/covsearch/tool.py
src/pharmpy/tools/crossval/__init__.py
src/pharmpy/tools/crossval/results.py
src/pharmpy/tools/estmethod/__init__.py
src/pharmpy/tools/estmethod/algorithms.py
src/pharmpy/tools/estmethod/report.rst
src/pharmpy/tools/estmethod/tool.py
src/pharmpy/tools/external/__init__.py
src/pharmpy/tools/external/results.py
src/pharmpy/tools/external/nlmixr/__init__.py
src/pharmpy/tools/external/nlmixr/run.py
src/pharmpy/tools/external/nonmem/__init__.py
src/pharmpy/tools/external/nonmem/config.py
src/pharmpy/tools/external/nonmem/results.py
src/pharmpy/tools/external/nonmem/results_file.py
src/pharmpy/tools/external/nonmem/run.py
src/pharmpy/tools/external/rxode/__init__.py
src/pharmpy/tools/external/rxode/run.py
src/pharmpy/tools/frem/__init__.py
src/pharmpy/tools/frem/models.py
src/pharmpy/tools/frem/report.rst
src/pharmpy/tools/frem/results.py
src/pharmpy/tools/frem/tool.py
src/pharmpy/tools/funcs/__init__.py
src/pharmpy/tools/funcs/ml.py
src/pharmpy/tools/funcs/summarize_individuals.py
src/pharmpy/tools/funcs/ml_models/infinds.tflite
src/pharmpy/tools/funcs/ml_models/outliers.tflite
src/pharmpy/tools/iivsearch/__init__.py
src/pharmpy/tools/iivsearch/algorithms.py
src/pharmpy/tools/iivsearch/tool.py
src/pharmpy/tools/iovsearch/__init__.py
src/pharmpy/tools/iovsearch/tool.py
src/pharmpy/tools/linearize/__init__.py
src/pharmpy/tools/linearize/results.py
src/pharmpy/tools/linearize/tool.py
src/pharmpy/tools/mfl/__init__.py
src/pharmpy/tools/mfl/filter.py
src/pharmpy/tools/mfl/grammar.py
src/pharmpy/tools/mfl/helpers.py
src/pharmpy/tools/mfl/interpreter.py
src/pharmpy/tools/mfl/parse.py
src/pharmpy/tools/mfl/stringify.py
src/pharmpy/tools/mfl/feature/__init__.py
src/pharmpy/tools/mfl/feature/absorption.py
src/pharmpy/tools/mfl/feature/covariate.py
src/pharmpy/tools/mfl/feature/direct_effect.py
src/pharmpy/tools/mfl/feature/effect_comp.py
src/pharmpy/tools/mfl/feature/elimination.py
src/pharmpy/tools/mfl/feature/feature.py
src/pharmpy/tools/mfl/feature/indirect_effect.py
src/pharmpy/tools/mfl/feature/lagtime.py
src/pharmpy/tools/mfl/feature/metabolite.py
src/pharmpy/tools/mfl/feature/peripherals.py
src/pharmpy/tools/mfl/feature/transits.py
src/pharmpy/tools/mfl/statement/__init__.py
src/pharmpy/tools/mfl/statement/definition.py
src/pharmpy/tools/mfl/statement/statement.py
src/pharmpy/tools/mfl/statement/feature/__init__.py
src/pharmpy/tools/mfl/statement/feature/absorption.py
src/pharmpy/tools/mfl/statement/feature/count_interpreter.py
src/pharmpy/tools/mfl/statement/feature/covariate.py
src/pharmpy/tools/mfl/statement/feature/direct_effect.py
src/pharmpy/tools/mfl/statement/feature/effect_comp.py
src/pharmpy/tools/mfl/statement/feature/elimination.py
src/pharmpy/tools/mfl/statement/feature/feature.py
src/pharmpy/tools/mfl/statement/feature/indirect_effect.py
src/pharmpy/tools/mfl/statement/feature/lagtime.py
src/pharmpy/tools/mfl/statement/feature/metabolite.py
src/pharmpy/tools/mfl/statement/feature/peripherals.py
src/pharmpy/tools/mfl/statement/feature/symbols.py
src/pharmpy/tools/mfl/statement/feature/transits.py
src/pharmpy/tools/modelfit/__init__.py
src/pharmpy/tools/modelfit/tool.py
src/pharmpy/tools/modelsearch/__init__.py
src/pharmpy/tools/modelsearch/algorithms.py
src/pharmpy/tools/modelsearch/tool.py
src/pharmpy/tools/qa/__init__.py
src/pharmpy/tools/qa/results.py
src/pharmpy/tools/retries/__init__.py
src/pharmpy/tools/retries/tool.py
src/pharmpy/tools/ruvsearch/__init__.py
src/pharmpy/tools/ruvsearch/results.py
src/pharmpy/tools/ruvsearch/tool.py
src/pharmpy/tools/scm/__init__.py
src/pharmpy/tools/scm/psn_wrapper.py
src/pharmpy/tools/scm/results.py
src/pharmpy/tools/simeval/__init__.py
src/pharmpy/tools/simeval/results.py
src/pharmpy/tools/simfit/__init__.py
src/pharmpy/tools/simfit/results.py
src/pharmpy/tools/structsearch/__init__.py
src/pharmpy/tools/structsearch/drugmetabolite.py
src/pharmpy/tools/structsearch/pkpd.py
src/pharmpy/tools/structsearch/tmdd.py
src/pharmpy/tools/structsearch/tool.py
src/pharmpy/workflows/__init__.py
src/pharmpy/workflows/args.py
src/pharmpy/workflows/call.py
src/pharmpy/workflows/context.py
src/pharmpy/workflows/execute.py
src/pharmpy/workflows/log.py
src/pharmpy/workflows/model_entry.py
src/pharmpy/workflows/optimize.py
src/pharmpy/workflows/results.py
src/pharmpy/workflows/task.py
src/pharmpy/workflows/workflow.py
src/pharmpy/workflows/dispatchers/__init__.py
src/pharmpy/workflows/dispatchers/local_dask.py
src/pharmpy/workflows/model_database/__init__.py
src/pharmpy/workflows/model_database/baseclass.py
src/pharmpy/workflows/model_database/local_directory.py
src/pharmpy/workflows/model_database/null_database.py
src/pharmpy/workflows/tool_database/__init__.py
src/pharmpy/workflows/tool_database/baseclass.py
src/pharmpy/workflows/tool_database/local_directory.py
src/pharmpy/workflows/tool_database/null_database.py
src/pharmpy_core.egg-info/PKG-INFO
src/pharmpy_core.egg-info/SOURCES.txt
src/pharmpy_core.egg-info/dependency_links.txt
src/pharmpy_core.egg-info/entry_points.txt
src/pharmpy_core.egg-info/not-zip-safe
src/pharmpy_core.egg-info/requires.txt
src/pharmpy_core.egg-info/top_level.txt
tests/__init__.py
tests/conftest.py
tests/lib.py
tests/cli/test_cli.py
tests/config/test_config.py
tests/deps/test_deps.py
tests/external/test_external.py
tests/external/test_nlmixr.py
tests/external/test_rxode.py
tests/integration/conftest.py
tests/integration/test_allometry.py
tests/integration/test_amd.py
tests/integration/test_bootstrap.py
tests/integration/test_common.py
tests/integration/test_covsearch.py
tests/integration/test_estmethod.py
tests/integration/test_fit.py
tests/integration/test_iivsearch.py
tests/integration/test_iovsearch.py
tests/integration/test_modelsearch.py
tests/integration/test_resume.py
tests/integration/test_retries.py
tests/integration/test_ruvsearch.py
tests/integration/test_structsearch.py
tests/internals/test_math.py
tests/internals/test_parse.py
tests/internals/test_unicode.py
tests/internals/expr/test_units.py
tests/internals/fn/test_type.py
tests/internals/fs/test_lock.py
tests/internals/fs/test_symlink.py
tests/internals/fs/test_tmp.py
tests/internals/module/test_lazy.py
tests/model/__init__.py
tests/model/test_datainfo.py
tests/model/test_estimation.py
tests/model/test_model.py
tests/model/test_parameter.py
tests/model/test_random_variables.py
tests/model/test_statements.py
tests/modeling/__init__.py
tests/modeling/test_allometry.py
tests/modeling/test_basic_models.py
tests/modeling/test_blq.py
tests/modeling/test_common.py
tests/modeling/test_compartments.py
tests/modeling/test_covariate_effect.py
tests/modeling/test_data_funcs.py
tests/modeling/test_error.py
tests/modeling/test_estimation_steps.py
tests/modeling/test_evaluate.py
tests/modeling/test_expressions.py
tests/modeling/test_help_functions.py
tests/modeling/test_iterators.py
tests/modeling/test_lrt.py
tests/modeling/test_metabolite.py
tests/modeling/test_odes.py
tests/modeling/test_parameter_sampling.py
tests/modeling/test_parameter_variability.py
tests/modeling/test_parameters.py
tests/modeling/test_pd.py
tests/modeling/test_plots.py
tests/modeling/test_random_variables.py
tests/modeling/test_results.py
tests/modeling/test_tmdd.py
tests/modeling/test_units.py
tests/nonmem/conftest.py
tests/nonmem/test_advan.py
tests/nonmem/test_des.py
tests/nonmem/test_fcon.py
tests/nonmem/test_input.py
tests/nonmem/test_modelfit_results.py
tests/nonmem/test_nonmem_model.py
tests/nonmem/test_nonmem_table.py
tests/nonmem/test_parser.py
tests/nonmem/test_read.py
tests/nonmem/output/test_nonmem_results_file.py
tests/nonmem/records/conftest.py
tests/nonmem/records/test_abbreviated.py
tests/nonmem/records/test_code.py
tests/nonmem/records/test_data.py
tests/nonmem/records/test_estimation_record.py
tests/nonmem/records/test_etas.py
tests/nonmem/records/test_factory.py
tests/nonmem/records/test_model_record.py
tests/nonmem/records/test_omega.py
tests/nonmem/records/test_option_record.py
tests/nonmem/records/test_problem.py
tests/nonmem/records/test_simulation.py
tests/nonmem/records/test_sizes.py
tests/nonmem/records/test_subroutines.py
tests/nonmem/records/test_theta.py
tests/testdata/pheno_data.csv
tests/testdata/frem/results.json
tests/testdata/nonmem/DDMODEL00000130
tests/testdata/nonmem/Simulated_CMS_colistin_PK_data.csv
tests/testdata/nonmem/file.csv
tests/testdata/nonmem/minimal.mod
tests/testdata/nonmem/pheno.datainfo
tests/testdata/nonmem/pheno.dta
tests/testdata/nonmem/pheno.ext
tests/testdata/nonmem/pheno.grd
tests/testdata/nonmem/pheno.lst
tests/testdata/nonmem/pheno.mod
tests/testdata/nonmem/pheno.phi
tests/testdata/nonmem/pheno_abbr.mod
tests/testdata/nonmem/pheno_abbr_comments.mod
tests/testdata/nonmem/pheno_block.mod
tests/testdata/nonmem/pheno_clashing_symbols.mod
tests/testdata/nonmem/pheno_design.coi
tests/testdata/nonmem/pheno_design.cor
tests/testdata/nonmem/pheno_design.cov
tests/testdata/nonmem/pheno_design.ext
tests/testdata/nonmem/pheno_design.lst
tests/testdata/nonmem/pheno_design.mod
tests/testdata/nonmem/pheno_design.msf
tests/testdata/nonmem/pheno_design.phi
tests/testdata/nonmem/pheno_design_ETAS.msf
tests/testdata/nonmem/pheno_etas.mod
tests/testdata/nonmem/pheno_multivariate_piecewise.mod
tests/testdata/nonmem/pheno_nm750.mod
tests/testdata/nonmem/pheno_no_obs_1stID.dta
tests/testdata/nonmem/pheno_pd.csv
tests/testdata/nonmem/pheno_pd.ctl
tests/testdata/nonmem/pheno_pd.ext
tests/testdata/nonmem/pheno_pd.lst
tests/testdata/nonmem/pheno_pd.mod
tests/testdata/nonmem/pheno_pd.phi
tests/testdata/nonmem/pheno_pd_mytab
tests/testdata/nonmem/pheno_rate.dta
tests/testdata/nonmem/pheno_real.coi
tests/testdata/nonmem/pheno_real.cor
tests/testdata/nonmem/pheno_real.cov
tests/testdata/nonmem/pheno_real.ext
tests/testdata/nonmem/pheno_real.lst
tests/testdata/nonmem/pheno_real.mod
tests/testdata/nonmem/pheno_real.phi
tests/testdata/nonmem/pheno_real.tab
tests/testdata/nonmem/pheno_real.xml
tests/testdata/nonmem/pheno_real_linbase.dta
tests/testdata/nonmem/pheno_real_linbase.ext
tests/testdata/nonmem/pheno_real_linbase.lst
tests/testdata/nonmem/pheno_real_linbase.mod
tests/testdata/nonmem/pheno_real_linbase.phi
tests/testdata/nonmem/pheno_real_linbase.tab
tests/testdata/nonmem/sdtab1
tests/testdata/nonmem/cdd/pheno_real.cov
tests/testdata/nonmem/cdd/pheno_real.ext
tests/testdata/nonmem/cdd/pheno_real.lst
tests/testdata/nonmem/cdd/pheno_real.mod
tests/testdata/nonmem/cdd/pheno_real.phi
tests/testdata/nonmem/cdd/pheno_real_bin10/meta.yaml
tests/testdata/nonmem/cdd/pheno_real_bin10/skipped_individuals1.csv
tests/testdata/nonmem/cdd/pheno_real_bin10/m1/cdd_1.cov
tests/testdata/nonmem/cdd/pheno_real_bin10/m1/cdd_1.ext
tests/testdata/nonmem/cdd/pheno_real_bin10/m1/cdd_1.lst
tests/testdata/nonmem/cdd/pheno_real_bin10/m1/cdd_1.mod
tests/testdata/nonmem/cdd/pheno_real_bin10/m1/cdd_10.cov
tests/testdata/nonmem/cdd/pheno_real_bin10/m1/cdd_10.ext
tests/testdata/nonmem/cdd/pheno_real_bin10/m1/cdd_10.lst
tests/testdata/nonmem/cdd/pheno_real_bin10/m1/cdd_10.mod
tests/testdata/nonmem/cdd/pheno_real_bin10/m1/cdd_2.cov
tests/testdata/nonmem/cdd/pheno_real_bin10/m1/cdd_2.ext
tests/testdata/nonmem/cdd/pheno_real_bin10/m1/cdd_2.lst
tests/testdata/nonmem/cdd/pheno_real_bin10/m1/cdd_2.mod
tests/testdata/nonmem/cdd/pheno_real_bin10/m1/cdd_3.cov
tests/testdata/nonmem/cdd/pheno_real_bin10/m1/cdd_3.ext
tests/testdata/nonmem/cdd/pheno_real_bin10/m1/cdd_3.lst
tests/testdata/nonmem/cdd/pheno_real_bin10/m1/cdd_3.mod
tests/testdata/nonmem/cdd/pheno_real_bin10/m1/cdd_4.cov
tests/testdata/nonmem/cdd/pheno_real_bin10/m1/cdd_4.ext
tests/testdata/nonmem/cdd/pheno_real_bin10/m1/cdd_4.lst
tests/testdata/nonmem/cdd/pheno_real_bin10/m1/cdd_4.mod
tests/testdata/nonmem/cdd/pheno_real_bin10/m1/cdd_5.cov
tests/testdata/nonmem/cdd/pheno_real_bin10/m1/cdd_5.ext
tests/testdata/nonmem/cdd/pheno_real_bin10/m1/cdd_5.lst
tests/testdata/nonmem/cdd/pheno_real_bin10/m1/cdd_5.mod
tests/testdata/nonmem/cdd/pheno_real_bin10/m1/cdd_6.cov
tests/testdata/nonmem/cdd/pheno_real_bin10/m1/cdd_6.ext
tests/testdata/nonmem/cdd/pheno_real_bin10/m1/cdd_6.lst
tests/testdata/nonmem/cdd/pheno_real_bin10/m1/cdd_6.mod
tests/testdata/nonmem/cdd/pheno_real_bin10/m1/cdd_7.cov
tests/testdata/nonmem/cdd/pheno_real_bin10/m1/cdd_7.ext
tests/testdata/nonmem/cdd/pheno_real_bin10/m1/cdd_7.lst
tests/testdata/nonmem/cdd/pheno_real_bin10/m1/cdd_7.mod
tests/testdata/nonmem/cdd/pheno_real_bin10/m1/cdd_8.cov
tests/testdata/nonmem/cdd/pheno_real_bin10/m1/cdd_8.ext
tests/testdata/nonmem/cdd/pheno_real_bin10/m1/cdd_8.lst
tests/testdata/nonmem/cdd/pheno_real_bin10/m1/cdd_8.mod
tests/testdata/nonmem/cdd/pheno_real_bin10/m1/cdd_9.cov
tests/testdata/nonmem/cdd/pheno_real_bin10/m1/cdd_9.ext
tests/testdata/nonmem/cdd/pheno_real_bin10/m1/cdd_9.lst
tests/testdata/nonmem/cdd/pheno_real_bin10/m1/cdd_9.mod
tests/testdata/nonmem/cdd/pheno_real_bin10/m1/rem_1.mod
tests/testdata/nonmem/cdd/pheno_real_bin10/m1/rem_10.mod
tests/testdata/nonmem/cdd/pheno_real_bin10/m1/rem_2.mod
tests/testdata/nonmem/cdd/pheno_real_bin10/m1/rem_3.mod
tests/testdata/nonmem/cdd/pheno_real_bin10/m1/rem_4.mod
tests/testdata/nonmem/cdd/pheno_real_bin10/m1/rem_5.mod
tests/testdata/nonmem/cdd/pheno_real_bin10/m1/rem_6.mod
tests/testdata/nonmem/cdd/pheno_real_bin10/m1/rem_7.mod
tests/testdata/nonmem/cdd/pheno_real_bin10/m1/rem_8.mod
tests/testdata/nonmem/cdd/pheno_real_bin10/m1/rem_9.mod
tests/testdata/nonmem/errors/control_stream_error.lst
tests/testdata/nonmem/errors/est_step_warning.lst
tests/testdata/nonmem/errors/estimate_near_boundary_warning.lst
tests/testdata/nonmem/errors/failed_run.ext
tests/testdata/nonmem/errors/failed_run.mod
tests/testdata/nonmem/errors/no_header_error.ext
tests/testdata/nonmem/errors/no_header_error.lst
tests/testdata/nonmem/errors/no_header_error_only_iter.ext
tests/testdata/nonmem/errors/rounding_error.lst
tests/testdata/nonmem/errors/run_interrupted.ext
tests/testdata/nonmem/errors/run_interrupted.mod
tests/testdata/nonmem/errors/zero_gradient_error.lst
tests/testdata/nonmem/fcon/FCON
tests/testdata/nonmem/fcon/FDATA
tests/testdata/nonmem/frem/pheno/frem_dataset.dta
tests/testdata/nonmem/frem/pheno/model_3.ext
tests/testdata/nonmem/frem/pheno/model_3.lst
tests/testdata/nonmem/frem/pheno/model_3.mod
tests/testdata/nonmem/frem/pheno/model_3.phi
tests/testdata/nonmem/frem/pheno/model_3_input.phi
tests/testdata/nonmem/frem/pheno/model_4.cov
tests/testdata/nonmem/frem/pheno/model_4.ext
tests/testdata/nonmem/frem/pheno/model_4.lst
tests/testdata/nonmem/frem/pheno/model_4.mod
tests/testdata/nonmem/frem/pheno/model_4.phi
tests/testdata/nonmem/frem/pheno/model_4_input.phi
tests/testdata/nonmem/frem/pheno_cat/frem_dataset.dta
tests/testdata/nonmem/frem/pheno_cat/model_4.cor
tests/testdata/nonmem/frem/pheno_cat/model_4.cov
tests/testdata/nonmem/frem/pheno_cat/model_4.ext
tests/testdata/nonmem/frem/pheno_cat/model_4.lst
tests/testdata/nonmem/frem/pheno_cat/model_4.mod
tests/testdata/nonmem/frem/pheno_cat/model_4.phi
tests/testdata/nonmem/frem/pheno_cat/model_4_input.phi
tests/testdata/nonmem/linearize/linearize_dir1/command.txt
tests/testdata/nonmem/linearize/linearize_dir1/pheno_linbase.ext
tests/testdata/nonmem/linearize/linearize_dir1/pheno_linbase.lst
tests/testdata/nonmem/linearize/linearize_dir1/pheno_linbase.mod
tests/testdata/nonmem/linearize/linearize_dir1/pheno_linbase.phi
tests/testdata/nonmem/linearize/linearize_dir1/scm_dir1/derivatives.ext
tests/testdata/nonmem/linearize/linearize_dir1/scm_dir1/derivatives.lst
tests/testdata/nonmem/linearize/linearize_dir1/scm_dir1/derivatives.mod
tests/testdata/nonmem/linearize/linearize_dir1/scm_dir1/derivatives.phi
tests/testdata/nonmem/modelfit_results/covariance/pheno_nocovariance.coi
tests/testdata/nonmem/modelfit_results/covariance/pheno_nocovariance.ext
tests/testdata/nonmem/modelfit_results/covariance/pheno_nocovariance.lst
tests/testdata/nonmem/modelfit_results/covariance/pheno_nocovariance.mod
tests/testdata/nonmem/modelfit_results/multPROB/multEST/withSIM/multprobmix_nm730.ext
tests/testdata/nonmem/modelfit_results/multPROB/multEST/withSIM/multprobmix_nm730.lst
tests/testdata/nonmem/modelfit_results/onePROB/multEST/noSIM/anneal2_V7_30_beta.lst
tests/testdata/nonmem/modelfit_results/onePROB/multEST/noSIM/pheno_multEST.dta
tests/testdata/nonmem/modelfit_results/onePROB/multEST/noSIM/pheno_multEST.ext
tests/testdata/nonmem/modelfit_results/onePROB/multEST/noSIM/pheno_multEST.lst
tests/testdata/nonmem/modelfit_results/onePROB/multEST/noSIM/pheno_multEST.mod
tests/testdata/nonmem/modelfit_results/onePROB/multEST/noSIM/pheno_multEST.phi
tests/testdata/nonmem/modelfit_results/onePROB/multEST/noSIM/superid2_6_V7_30_beta.lst
tests/testdata/nonmem/modelfit_results/onePROB/multEST/noSIM/withBayes.cov
tests/testdata/nonmem/modelfit_results/onePROB/multEST/noSIM/withBayes.ext
tests/testdata/nonmem/modelfit_results/onePROB/multEST/noSIM/withBayes.lst
tests/testdata/nonmem/modelfit_results/onePROB/multEST/noSIM/withBayes.mod
tests/testdata/nonmem/modelfit_results/onePROB/multEST/noSIM/withBayes.phi
tests/testdata/nonmem/modelfit_results/onePROB/noESTwithSIM/onlysim.ext
tests/testdata/nonmem/modelfit_results/onePROB/noESTwithSIM/onlysim.lst
tests/testdata/nonmem/modelfit_results/onePROB/noESTwithSIM/onlysim.mod
tests/testdata/nonmem/modelfit_results/onePROB/oneEST/noSIM/UseCase7.lst
tests/testdata/nonmem/modelfit_results/onePROB/oneEST/noSIM/example6b_V7_30_beta.lst
tests/testdata/nonmem/modelfit_results/onePROB/oneEST/noSIM/hessian_error.lst
tests/testdata/nonmem/modelfit_results/onePROB/oneEST/noSIM/large_s_matrix_cov_fail.lst
tests/testdata/nonmem/modelfit_results/onePROB/oneEST/noSIM/maxeval0.ext
tests/testdata/nonmem/modelfit_results/onePROB/oneEST/noSIM/maxeval0.lst
tests/testdata/nonmem/modelfit_results/onePROB/oneEST/noSIM/maxeval0.mod
tests/testdata/nonmem/modelfit_results/onePROB/oneEST/noSIM/maxeval3.cov
tests/testdata/nonmem/modelfit_results/onePROB/oneEST/noSIM/maxeval3.ext
tests/testdata/nonmem/modelfit_results/onePROB/oneEST/noSIM/maxeval3.lst
tests/testdata/nonmem/modelfit_results/onePROB/oneEST/noSIM/maxeval3.mod
tests/testdata/nonmem/modelfit_results/onePROB/oneEST/noSIM/maxeval3.phi
tests/testdata/nonmem/modelfit_results/onePROB/oneEST/noSIM/mox_fail_nonp.lst
tests/testdata/nonmem/modelfit_results/onePROB/oneEST/noSIM/mox_nocov_nonp.lst
tests/testdata/nonmem/modelfit_results/onePROB/oneEST/noSIM/near_bounds.ext
tests/testdata/nonmem/modelfit_results/onePROB/oneEST/noSIM/near_bounds.lst
tests/testdata/nonmem/modelfit_results/onePROB/oneEST/noSIM/near_bounds.mod
tests/testdata/nonmem/modelfit_results/onePROB/oneEST/noSIM/nm710_fail_negV.lst
tests/testdata/nonmem/modelfit_results/onePROB/oneEST/noSIM/pheno.dta
tests/testdata/nonmem/modelfit_results/onePROB/oneEST/noSIM/pheno.ext
tests/testdata/nonmem/modelfit_results/onePROB/oneEST/noSIM/pheno.lst
tests/testdata/nonmem/modelfit_results/onePROB/oneEST/noSIM/pheno.mod
tests/testdata/nonmem/modelfit_results/onePROB/oneEST/noSIM/pheno.phi
tests/testdata/nonmem/modelfit_results/onePROB/oneEST/noSIM/pheno_nonp.lst
tests/testdata/nonmem/modelfit_results/onePROB/oneEST/noSIM/phenocorr.lst
tests/testdata/nonmem/modelfit_results/onePROB/oneEST/noSIM/sparse_matrix_with_msfi.lst
tests/testdata/nonmem/modelfit_results/onePROB/oneEST/noSIM/theo.lst
tests/testdata/nonmem/modelfit_results/onePROB/oneEST/noSIM/theo_nonp.lst
tests/testdata/nonmem/modelfit_results/onePROB/oneEST/noSIM/theo_withcov.lst
tests/testdata/nonmem/modelfit_results/onePROB/oneEST/noSIM/warfarin_ddmore.lst
tests/testdata/nonmem/modelfit_results/onePROB/oneEST/withSIM/control3boot.ext
tests/testdata/nonmem/modelfit_results/onePROB/oneEST/withSIM/control3boot.res
tests/testdata/nonmem/modelfit_results/simfit/sim-1.ext
tests/testdata/nonmem/modelfit_results/simfit/sim-1.lst
tests/testdata/nonmem/modelfit_results/simfit/sim-1.mod
tests/testdata/nonmem/modelfit_results/simfit/sim-1.phi
tests/testdata/nonmem/modeling/pheno_1transit.mod
tests/testdata/nonmem/modeling/pheno_2transits.mod
tests/testdata/nonmem/modeling/pheno_advan1.mod
tests/testdata/nonmem/modeling/pheno_advan11.mod
tests/testdata/nonmem/modeling/pheno_advan12.mod
tests/testdata/nonmem/modeling/pheno_advan1_zero_order.mod
tests/testdata/nonmem/modeling/pheno_advan2.mod
tests/testdata/nonmem/modeling/pheno_advan2_seq.mod
tests/testdata/nonmem/modeling/pheno_advan3.mod
tests/testdata/nonmem/modeling/pheno_advan4.mod
tests/testdata/nonmem/modeling/pheno_advan5_depot.mod
tests/testdata/nonmem/modeling/pheno_advan5_nodepot.mod
tests/testdata/nonmem/modeling/pheno_zero_order.csv
tests/testdata/nonmem/modeling/transit_indirect_reabsorption.mod
tests/testdata/nonmem/models/fviii6.datainfo
tests/testdata/nonmem/models/fviii6.mod
tests/testdata/nonmem/models/fviii6.prn
tests/testdata/nonmem/models/mox1.cov
tests/testdata/nonmem/models/mox1.ext
tests/testdata/nonmem/models/mox1.lst
tests/testdata/nonmem/models/mox1.mod
tests/testdata/nonmem/models/mox1.phi
tests/testdata/nonmem/models/mox2.ext
tests/testdata/nonmem/models/mox2.lst
tests/testdata/nonmem/models/mox2.mod
tests/testdata/nonmem/models/mox2.phi
tests/testdata/nonmem/models/mox_2comp.cov
tests/testdata/nonmem/models/mox_2comp.ext
tests/testdata/nonmem/models/mox_2comp.lst
tests/testdata/nonmem/models/mox_2comp.mod
tests/testdata/nonmem/models/mox_2comp.phi
tests/testdata/nonmem/models/mox_simulated_log.csv
tests/testdata/nonmem/models/mox_simulated_normal.csv
tests/testdata/nonmem/models/mox_simulated_normal.datainfo
tests/testdata/nonmem/models/moxo_simulated_amd.csv
tests/testdata/nonmem/models/moxo_simulated_amd.datainfo
tests/testdata/nonmem/models/mytab_mox2
tests/testdata/nonmem/models/pef.csv
tests/testdata/nonmem/models/pef.mod
tests/testdata/nonmem/models/pheno5.cor
tests/testdata/nonmem/models/pheno5.cov
tests/testdata/nonmem/models/pheno5.csv
tests/testdata/nonmem/models/pheno5.ext
tests/testdata/nonmem/models/pheno5.lst
tests/testdata/nonmem/models/pheno5.mod
tests/testdata/nonmem/models/pheno5.phi
tests/testdata/nonmem/models/pheno_advan3_trans1.ext
tests/testdata/nonmem/models/pheno_advan3_trans1.lst
tests/testdata/nonmem/models/pheno_advan3_trans1.mod
tests/testdata/nonmem/models/pheno_advan3_trans1.phi
tests/testdata/nonmem/models/pheno_conc.mod
tests/testdata/nonmem/models/pheno_des_assignments.mod
tests/testdata/nonmem/models/pheno_dvid.csv
tests/testdata/nonmem/models/pheno_dvid.mod
tests/testdata/nonmem/models/pheno_mu_2probs.cor
tests/testdata/nonmem/models/pheno_mu_2probs.cov
tests/testdata/nonmem/models/pheno_mu_2probs.ext
tests/testdata/nonmem/models/pheno_mu_2probs.lst
tests/testdata/nonmem/models/pheno_mu_2probs.mod
tests/testdata/nonmem/models/pheno_mu_2probs.phi
tests/testdata/nonmem/models/pheno_noifs.coi
tests/testdata/nonmem/models/pheno_noifs.cor
tests/testdata/nonmem/models/pheno_noifs.cov
tests/testdata/nonmem/models/pheno_noifs.ext
tests/testdata/nonmem/models/pheno_noifs.lst
tests/testdata/nonmem/models/pheno_noifs.mod
tests/testdata/nonmem/models/pheno_noifs.phi
tests/testdata/nonmem/models/pheno_trans1.ext
tests/testdata/nonmem/models/pheno_trans1.lst
tests/testdata/nonmem/models/pheno_trans1.mod
tests/testdata/nonmem/models/pheno_trans1.phi
tests/testdata/nonmem/qa/add_etas_linbase.dta
tests/testdata/nonmem/qa/add_etas_linbase.ext
tests/testdata/nonmem/qa/add_etas_linbase.lst
tests/testdata/nonmem/qa/add_etas_linbase.mod
tests/testdata/nonmem/qa/boxcox.ext
tests/testdata/nonmem/qa/boxcox.lst
tests/testdata/nonmem/qa/boxcox.mod
tests/testdata/nonmem/qa/boxcox.phi
tests/testdata/nonmem/qa/cdd_results.json
tests/testdata/nonmem/qa/fullblock.ext
tests/testdata/nonmem/qa/fullblock.lst
tests/testdata/nonmem/qa/fullblock.mod
tests/testdata/nonmem/qa/fullblock.phi
tests/testdata/nonmem/qa/iov.ext
tests/testdata/nonmem/qa/iov.lst
tests/testdata/nonmem/qa/iov.mod
tests/testdata/nonmem/qa/iov.phi
tests/testdata/nonmem/qa/pheno_linbase.dta
tests/testdata/nonmem/qa/pheno_linbase.ext
tests/testdata/nonmem/qa/pheno_linbase.lst
tests/testdata/nonmem/qa/pheno_linbase.mod
tests/testdata/nonmem/qa/pheno_linbase.phi
tests/testdata/nonmem/qa/resmod_results.json
tests/testdata/nonmem/qa/scm_results.json
tests/testdata/nonmem/qa/simeval_results.json
tests/testdata/nonmem/qa/tdist.ext
tests/testdata/nonmem/qa/tdist.lst
tests/testdata/nonmem/qa/tdist.mod
tests/testdata/nonmem/qa/tdist.phi
tests/testdata/nonmem/ruvsearch/mox3.ext
tests/testdata/nonmem/ruvsearch/mox3.lst
tests/testdata/nonmem/ruvsearch/mox3.mod
tests/testdata/nonmem/ruvsearch/mox3.phi
tests/testdata/nonmem/ruvsearch/moxo_simulated_resmod.csv
tests/testdata/nonmem/ruvsearch/mytab
tests/testdata/nonmem/scm/localmin.logf
tests/testdata/nonmem/scm/meta.yaml
tests/testdata/nonmem/scm/backward_dir1/config_fake.scm
tests/testdata/nonmem/scm/backward_dir1/meta.yaml
tests/testdata/nonmem/scm/backward_dir1/scmlog.txt
tests/testdata/nonmem/scm/gofofv_dir1/scmlog.txt
tests/testdata/nonmem/scm/log_steps/backward_ofv_1.txt
tests/testdata/nonmem/scm/log_steps/backward_pval_1.txt
tests/testdata/nonmem/scm/log_steps/backward_pval_2.txt
tests/testdata/nonmem/scm/log_steps/forward_ofv_1.txt
tests/testdata/nonmem/scm/log_steps/forward_pval_1.txt
tests/testdata/nonmem/scm/log_steps/forward_pval_2.txt
tests/testdata/nonmem/scm/log_steps/forward_pval_3.txt
tests/testdata/nonmem/scm/log_steps/forward_pval_4.txt
tests/testdata/nonmem/scm/mergeofv_dir1/config_havebaserun.scm
tests/testdata/nonmem/scm/mergeofv_dir1/meta.yaml
tests/testdata/nonmem/scm/mergeofv_dir1/scmlog.txt
tests/testdata/nonmem/scm/mergeofv_dir2/config_havebaserun.scm
tests/testdata/nonmem/scm/mergeofv_dir2/meta.yaml
tests/testdata/nonmem/scm/mergeofv_dir2/scmlog.txt
tests/testdata/nonmem/scm/onlyforward_dir1/config_normal.scm
tests/testdata/nonmem/scm/onlyforward_dir1/meta.yaml
tests/testdata/nonmem/scm/onlyforward_dir1/scmlog.txt
tests/testdata/nonmem/scm/scm_dir1/scmlog.txt
tests/testdata/nonmem/scm/scmplus_dir1/scmlog.txt
tests/testdata/nonmem/secondary_parameters/pheno.cov
tests/testdata/nonmem/secondary_parameters/pheno.dta
tests/testdata/nonmem/secondary_parameters/pheno.ext
tests/testdata/nonmem/secondary_parameters/pheno.lst
tests/testdata/nonmem/secondary_parameters/pheno.mod
tests/testdata/nonmem/secondary_parameters/pheno.phi
tests/testdata/nonmem/secondary_parameters/run1.cov
tests/testdata/nonmem/secondary_parameters/run1.ext
tests/testdata/nonmem/secondary_parameters/run1.lst
tests/testdata/nonmem/secondary_parameters/run1.mod
tests/testdata/nonmem/secondary_parameters/run1.phi
tests/testdata/nonmem/secondary_parameters/run2.cov
tests/testdata/nonmem/secondary_parameters/run2.ext
tests/testdata/nonmem/secondary_parameters/run2.lst
tests/testdata/nonmem/secondary_parameters/run2.mod
tests/testdata/nonmem/secondary_parameters/run2.phi
tests/testdata/psn/crossval_dir1/command.txt
tests/testdata/psn/crossval_dir1/est_data0.dta
tests/testdata/psn/crossval_dir1/est_data1.dta
tests/testdata/psn/crossval_dir1/est_data2.dta
tests/testdata/psn/crossval_dir1/est_data3.dta
tests/testdata/psn/crossval_dir1/meta.yaml
tests/testdata/psn/crossval_dir1/pred_data0.dta
tests/testdata/psn/crossval_dir1/pred_data1.dta
tests/testdata/psn/crossval_dir1/pred_data2.dta
tests/testdata/psn/crossval_dir1/pred_data3.dta
tests/testdata/psn/crossval_dir1/version_and_option_info.txt
tests/testdata/psn/crossval_dir1/xv_result.csv
tests/testdata/psn/crossval_dir1/m1/est_model0.cor
tests/testdata/psn/crossval_dir1/m1/est_model0.cov
tests/testdata/psn/crossval_dir1/m1/est_model0.ext
tests/testdata/psn/crossval_dir1/m1/est_model0.lst
tests/testdata/psn/crossval_dir1/m1/est_model0.mod
tests/testdata/psn/crossval_dir1/m1/est_model0.phi
tests/testdata/psn/crossval_dir1/m1/est_model1.cor
tests/testdata/psn/crossval_dir1/m1/est_model1.cov
tests/testdata/psn/crossval_dir1/m1/est_model1.ext
tests/testdata/psn/crossval_dir1/m1/est_model1.lst
tests/testdata/psn/crossval_dir1/m1/est_model1.mod
tests/testdata/psn/crossval_dir1/m1/est_model1.phi
tests/testdata/psn/crossval_dir1/m1/est_model2.cor
tests/testdata/psn/crossval_dir1/m1/est_model2.cov
tests/testdata/psn/crossval_dir1/m1/est_model2.ext
tests/testdata/psn/crossval_dir1/m1/est_model2.lst
tests/testdata/psn/crossval_dir1/m1/est_model2.mod
tests/testdata/psn/crossval_dir1/m1/est_model2.phi
tests/testdata/psn/crossval_dir1/m1/est_model3.cor
tests/testdata/psn/crossval_dir1/m1/est_model3.cov
tests/testdata/psn/crossval_dir1/m1/est_model3.ext
tests/testdata/psn/crossval_dir1/m1/est_model3.lst
tests/testdata/psn/crossval_dir1/m1/est_model3.mod
tests/testdata/psn/crossval_dir1/m1/est_model3.phi
tests/testdata/psn/crossval_dir1/m1/pred_model0.ext
tests/testdata/psn/crossval_dir1/m1/pred_model0.lst
tests/testdata/psn/crossval_dir1/m1/pred_model0.mod
tests/testdata/psn/crossval_dir1/m1/pred_model0.phi
tests/testdata/psn/crossval_dir1/m1/pred_model1.ext
tests/testdata/psn/crossval_dir1/m1/pred_model1.lst
tests/testdata/psn/crossval_dir1/m1/pred_model1.mod
tests/testdata/psn/crossval_dir1/m1/pred_model1.phi
tests/testdata/psn/crossval_dir1/m1/pred_model2.ext
tests/testdata/psn/crossval_dir1/m1/pred_model2.lst
tests/testdata/psn/crossval_dir1/m1/pred_model2.mod
tests/testdata/psn/crossval_dir1/m1/pred_model2.phi
tests/testdata/psn/crossval_dir1/m1/pred_model3.cor
tests/testdata/psn/crossval_dir1/m1/pred_model3.cov
tests/testdata/psn/crossval_dir1/m1/pred_model3.ext
tests/testdata/psn/crossval_dir1/m1/pred_model3.lst
tests/testdata/psn/crossval_dir1/m1/pred_model3.mod
tests/testdata/psn/crossval_dir1/m1/pred_model3.phi
tests/testdata/psn/frem_dir1/command.txt
tests/testdata/psn/frem_dir1/covariates_summary.csv
tests/testdata/psn/frem_dir1/frem_dataset.dta
tests/testdata/psn/frem_dir1/frem_results.csv
tests/testdata/psn/frem_dir1/meta.yaml
tests/testdata/psn/frem_dir1/proposal_density.cov
tests/testdata/psn/frem_dir1/version_and_option_info.txt
tests/testdata/psn/frem_dir1/final_models/model_4.ext
tests/testdata/psn/frem_dir1/final_models/model_4.lst
tests/testdata/psn/frem_dir1/final_models/model_4.mod
tests/testdata/psn/frem_dir1/final_models/model_4.phi
tests/testdata/psn/frem_dir1/final_models/model_4_input.phi
tests/testdata/psn/frem_dir1/m1/filter_data_model.ext
tests/testdata/psn/frem_dir1/m1/filter_data_model.lst
tests/testdata/psn/frem_dir1/m1/filter_data_model.mod
tests/testdata/psn/frem_dir1/m1/filter_data_model.phi
tests/testdata/psn/frem_dir1/m1/filtered_plus_type0.dta
tests/testdata/psn/frem_dir1/m1/model_1.cov
tests/testdata/psn/frem_dir1/m1/model_1.ext
tests/testdata/psn/frem_dir1/m1/model_1.lst
tests/testdata/psn/frem_dir1/m1/model_1.mod
tests/testdata/psn/frem_dir1/m1/model_1.phi
tests/testdata/psn/frem_dir1/m1/model_1b.mod
tests/testdata/psn/frem_dir1/m1/model_1b.phi
tests/testdata/psn/frem_dir1/m1/model_2.cor
tests/testdata/psn/frem_dir1/m1/model_2.cov
tests/testdata/psn/frem_dir1/m1/model_2.ext
tests/testdata/psn/frem_dir1/m1/model_2.lst
tests/testdata/psn/frem_dir1/m1/model_2.mod
tests/testdata/psn/frem_dir1/m1/model_2.phi
tests/testdata/psn/frem_dir1/m1/model_2_input.phi
tests/testdata/psn/frem_dir1/m1/model_3.ext
tests/testdata/psn/frem_dir1/m1/model_3.lst
tests/testdata/psn/frem_dir1/m1/model_3.mod
tests/testdata/psn/frem_dir1/m1/model_3.phi
tests/testdata/psn/frem_dir1/m1/model_3_input.phi
tests/testdata/psn/frem_dir1/m1/model_3b.ext
tests/testdata/psn/frem_dir1/m1/model_3b.lst
tests/testdata/psn/frem_dir1/m1/model_3b.mod
tests/testdata/psn/frem_dir1/m1/model_3b.phi
tests/testdata/psn/frem_dir1/m1/model_3b_input.phi
tests/testdata/psn/qa_dir1/command.txt
tests/testdata/psn/qa_dir1/pheno_real_linbase.dta
tests/testdata/psn/qa_dir1/pheno_real_linbase.ext
tests/testdata/psn/qa_dir1/pheno_real_linbase.lst
tests/testdata/psn/qa_dir1/pheno_real_linbase.mod
tests/testdata/psn/qa_dir1/pheno_real_linbase.phi
tests/testdata/psn/qa_dir1/results_summary.yaml
tests/testdata/psn/qa_dir1/linearize_run/results.json
tests/testdata/psn/qa_dir1/linearize_run/scm_dir1/derivatives.ext
tests/testdata/psn/qa_dir1/linearize_run/scm_dir1/derivatives.lst
tests/testdata/psn/qa_dir1/linearize_run/scm_dir1/derivatives.mod
tests/testdata/psn/qa_dir1/linearize_run/scm_dir1/derivatives.phi
tests/testdata/psn/qa_dir1/linearize_run/scm_dir1/extra_table
tests/testdata/psn/resmod_dir1/resmod_results.csv
tests/testdata/psn/resmod_dir2/resmod_results.csv
tests/testdata/psn/simeval_dir1/summary_cwres.csv
tests/testdata/psn/simeval_dir1/m1/orig_pred.dta
tests/testdata/psn/simeval_dir1/m1/original.cor
tests/testdata/psn/simeval_dir1/m1/original.cov
tests/testdata/psn/simeval_dir1/m1/original.ext
tests/testdata/psn/simeval_dir1/m1/original.mod
tests/testdata/psn/simeval_dir1/m1/original.phi
tests/testdata/psn/simeval_dir1/m1/original_res_table.dta
tests/testdata/psn/simeval_dir1/m1/pheno.dta
tests/testdata/psn/simeval_dir1/m1/sim-1.ext
tests/testdata/psn/simeval_dir1/m1/sim-1.lst
tests/testdata/psn/simeval_dir1/m1/sim-1.mod
tests/testdata/psn/simeval_dir1/m1/sim-1.phi
tests/testdata/psn/simeval_dir1/m1/sim-2.ext
tests/testdata/psn/simeval_dir1/m1/sim-2.lst
tests/testdata/psn/simeval_dir1/m1/sim-2.mod
tests/testdata/psn/simeval_dir1/m1/sim-2.phi
tests/testdata/psn/simeval_dir1/m1/sim-3.ext
tests/testdata/psn/simeval_dir1/m1/sim-3.lst
tests/testdata/psn/simeval_dir1/m1/sim-3.mod
tests/testdata/psn/simeval_dir1/m1/sim-3.phi
tests/testdata/psn/simeval_dir1/m1/sim-4.ext
tests/testdata/psn/simeval_dir1/m1/sim-4.lst
tests/testdata/psn/simeval_dir1/m1/sim-4.mod
tests/testdata/psn/simeval_dir1/m1/sim-4.phi
tests/testdata/psn/simeval_dir1/m1/sim-5.ext
tests/testdata/psn/simeval_dir1/m1/sim-5.lst
tests/testdata/psn/simeval_dir1/m1/sim-5.mod
tests/testdata/psn/simeval_dir1/m1/sim-5.phi
tests/testdata/psn/simeval_dir1/m1/sim-6.ext
tests/testdata/psn/simeval_dir1/m1/sim-6.lst
tests/testdata/psn/simeval_dir1/m1/sim-6.mod
tests/testdata/psn/simeval_dir1/m1/sim-6.phi
tests/testdata/psn/simeval_dir1/m1/sim-7.ext
tests/testdata/psn/simeval_dir1/m1/sim-7.lst
tests/testdata/psn/simeval_dir1/m1/sim-7.mod
tests/testdata/psn/simeval_dir1/m1/sim-7.phi
tests/testdata/psn/simeval_dir1/m1/sim-8.ext
tests/testdata/psn/simeval_dir1/m1/sim-8.lst
tests/testdata/psn/simeval_dir1/m1/sim-8.mod
tests/testdata/psn/simeval_dir1/m1/sim-8.phi
tests/testdata/psn/simeval_dir1/m1/sim_res_table-1.dta
tests/testdata/psn/simeval_dir1/m1/sim_res_table-2.dta
tests/testdata/psn/simeval_dir1/m1/sim_res_table-3.dta
tests/testdata/psn/simeval_dir1/m1/sim_res_table-4.dta
tests/testdata/psn/simeval_dir1/m1/sim_res_table-5.dta
tests/testdata/psn/simeval_dir1/m1/sim_res_table-6.dta
tests/testdata/psn/simeval_dir1/m1/sim_res_table-7.dta
tests/testdata/psn/simeval_dir1/m1/sim_res_table-8.dta
tests/testdata/results/allometry_results.json
tests/testdata/results/amd_results.json
tests/testdata/results/bootstrap_results.json
tests/testdata/results/cdd_results.json
tests/testdata/results/covsearch_results.json
tests/testdata/results/estmethod_results.json
tests/testdata/results/iivsearch_results.json
tests/testdata/results/iovsearch_results.json
tests/testdata/results/linearize_results.json
tests/testdata/results/metadata.json
tests/testdata/results/modelsearch_results.json
tests/testdata/results/qa_results.json
tests/testdata/results/retries_results.json
tests/testdata/results/ruvsearch_results.json
tests/testdata/results/structsearch_results_pkpd.json
tests/testdata/results/structsearch_results_tmdd.json
tests/testdata/results/tool_databases/modelsearch/metadata.json
tests/testdata/results/tool_databases/modelsearch/results.csv
tests/testdata/results/tool_databases/modelsearch/results.json
tests/testdata/results/tool_databases/modelsearch/models/.lock
tests/testdata/results/tool_databases/modelsearch/models/.datasets/input_model.csv
tests/testdata/results/tool_databases/modelsearch/models/.datasets/input_model.datainfo
tests/testdata/results/tool_databases/modelsearch/models/.datasets/.hash/-7907770233072098756/input_model.csv
tests/testdata/results/tool_databases/modelsearch/models/input_model/input_model.mod
tests/testdata/results/tool_databases/modelsearch/models/input_model/.pharmpy/results.json
tests/testdata/results/tool_databases/modelsearch/models/modelsearch_run1/modelsearch_run1.ext
tests/testdata/results/tool_databases/modelsearch/models/modelsearch_run1/modelsearch_run1.lst
tests/testdata/results/tool_databases/modelsearch/models/modelsearch_run1/modelsearch_run1.mod
tests/testdata/results/tool_databases/modelsearch/models/modelsearch_run1/modelsearch_run1.phi
tests/testdata/results/tool_databases/modelsearch/models/modelsearch_run1/mytab_mox1
tests/testdata/results/tool_databases/modelsearch/models/modelsearch_run1/nonmem.json
tests/testdata/results/tool_databases/modelsearch/models/modelsearch_run1/stderr
tests/testdata/results/tool_databases/modelsearch/models/modelsearch_run1/stdout
tests/testdata/results/tool_databases/modelsearch/models/modelsearch_run1/.pharmpy/metadata.json
tests/testdata/results/tool_databases/modelsearch/models/modelsearch_run1/.pharmpy/results.json
tests/testdata/results/tool_databases/modelsearch/models/modelsearch_run2/modelsearch_run2.ext
tests/testdata/results/tool_databases/modelsearch/models/modelsearch_run2/modelsearch_run2.lst
tests/testdata/results/tool_databases/modelsearch/models/modelsearch_run2/modelsearch_run2.mod
tests/testdata/results/tool_databases/modelsearch/models/modelsearch_run2/modelsearch_run2.phi
tests/testdata/results/tool_databases/modelsearch/models/modelsearch_run2/mytab_mox2
tests/testdata/results/tool_databases/modelsearch/models/modelsearch_run2/nonmem.json
tests/testdata/results/tool_databases/modelsearch/models/modelsearch_run2/stderr
tests/testdata/results/tool_databases/modelsearch/models/modelsearch_run2/stdout
tests/testdata/results/tool_databases/modelsearch/models/modelsearch_run2/.pharmpy/metadata.json
tests/testdata/results/tool_databases/modelsearch/models/modelsearch_run2/.pharmpy/results.json
tests/testdata/results/tool_databases/modelsearch/models/modelsearch_run3/modelsearch_run3.ext
tests/testdata/results/tool_databases/modelsearch/models/modelsearch_run3/modelsearch_run3.lst
tests/testdata/results/tool_databases/modelsearch/models/modelsearch_run3/modelsearch_run3.mod
tests/testdata/results/tool_databases/modelsearch/models/modelsearch_run3/modelsearch_run3.phi
tests/testdata/results/tool_databases/modelsearch/models/modelsearch_run3/mytab_mox3
tests/testdata/results/tool_databases/modelsearch/models/modelsearch_run3/nonmem.json
tests/testdata/results/tool_databases/modelsearch/models/modelsearch_run3/stderr
tests/testdata/results/tool_databases/modelsearch/models/modelsearch_run3/stdout
tests/testdata/results/tool_databases/modelsearch/models/modelsearch_run3/.pharmpy/metadata.json
tests/testdata/results/tool_databases/modelsearch/models/modelsearch_run3/.pharmpy/results.json
tests/testdata/results/tool_databases/modelsearch/models/modelsearch_run4/modelsearch_run4.ext
tests/testdata/results/tool_databases/modelsearch/models/modelsearch_run4/modelsearch_run4.lst
tests/testdata/results/tool_databases/modelsearch/models/modelsearch_run4/modelsearch_run4.mod
tests/testdata/results/tool_databases/modelsearch/models/modelsearch_run4/modelsearch_run4.phi
tests/testdata/results/tool_databases/modelsearch/models/modelsearch_run4/mytab_mox4
tests/testdata/results/tool_databases/modelsearch/models/modelsearch_run4/nonmem.json
tests/testdata/results/tool_databases/modelsearch/models/modelsearch_run4/stderr
tests/testdata/results/tool_databases/modelsearch/models/modelsearch_run4/stdout
tests/testdata/results/tool_databases/modelsearch/models/modelsearch_run4/.pharmpy/metadata.json
tests/testdata/results/tool_databases/modelsearch/models/modelsearch_run4/.pharmpy/results.json
tests/testdata/results/tool_databases/structsearch_pkpd/metadata.json
tests/testdata/results/tool_databases/structsearch_pkpd/results.csv
tests/testdata/results/tool_databases/structsearch_pkpd/results.json
tests/testdata/results/tool_databases/structsearch_pkpd/models/.lock
tests/testdata/results/tool_databases/structsearch_pkpd/models/.datasets/input_model.csv
tests/testdata/results/tool_databases/structsearch_pkpd/models/.datasets/input_model.datainfo
tests/testdata/results/tool_databases/structsearch_pkpd/models/.datasets/.hash/0ec8ca4bb29296b595136617ccafe5354f7cf19857ea88a7ea54255d3b106389/input_model.csv
tests/testdata/results/tool_databases/structsearch_pkpd/models/baseline_model/baseline_model.ext
tests/testdata/results/tool_databases/structsearch_pkpd/models/baseline_model/baseline_model.lst
tests/testdata/results/tool_databases/structsearch_pkpd/models/baseline_model/baseline_model.mod
tests/testdata/results/tool_databases/structsearch_pkpd/models/baseline_model/baseline_model.phi
tests/testdata/results/tool_databases/structsearch_pkpd/models/baseline_model/nonmem.json
tests/testdata/results/tool_databases/structsearch_pkpd/models/baseline_model/pd_sdtab1
tests/testdata/results/tool_databases/structsearch_pkpd/models/baseline_model/stderr
tests/testdata/results/tool_databases/structsearch_pkpd/models/baseline_model/stdout
tests/testdata/results/tool_databases/structsearch_pkpd/models/baseline_model/.pharmpy/metadata.json
tests/testdata/results/tool_databases/structsearch_pkpd/models/baseline_model/.pharmpy/results.json
tests/testdata/results/tool_databases/structsearch_pkpd/models/input_model/input_model.mod
tests/testdata/results/tool_databases/structsearch_pkpd/models/input_model/.pharmpy/results.json
tests/testdata/results/tool_databases/structsearch_pkpd/models/structsearch_run1/nonmem.json
tests/testdata/results/tool_databases/structsearch_pkpd/models/structsearch_run1/pd_sdtab1
tests/testdata/results/tool_databases/structsearch_pkpd/models/structsearch_run1/stderr
tests/testdata/results/tool_databases/structsearch_pkpd/models/structsearch_run1/stdout
tests/testdata/results/tool_databases/structsearch_pkpd/models/structsearch_run1/structsearch_run1.ext
tests/testdata/results/tool_databases/structsearch_pkpd/models/structsearch_run1/structsearch_run1.lst
tests/testdata/results/tool_databases/structsearch_pkpd/models/structsearch_run1/structsearch_run1.mod
tests/testdata/results/tool_databases/structsearch_pkpd/models/structsearch_run1/structsearch_run1.phi
tests/testdata/results/tool_databases/structsearch_pkpd/models/structsearch_run1/.pharmpy/metadata.json
tests/testdata/results/tool_databases/structsearch_pkpd/models/structsearch_run1/.pharmpy/results.json
tests/testdata/results/tool_databases/structsearch_pkpd/models/structsearch_run2/nonmem.json
tests/testdata/results/tool_databases/structsearch_pkpd/models/structsearch_run2/pd_sdtab2
tests/testdata/results/tool_databases/structsearch_pkpd/models/structsearch_run2/stderr
tests/testdata/results/tool_databases/structsearch_pkpd/models/structsearch_run2/stdout
tests/testdata/results/tool_databases/structsearch_pkpd/models/structsearch_run2/structsearch_run2.ext
tests/testdata/results/tool_databases/structsearch_pkpd/models/structsearch_run2/structsearch_run2.lst
tests/testdata/results/tool_databases/structsearch_pkpd/models/structsearch_run2/structsearch_run2.mod
tests/testdata/results/tool_databases/structsearch_pkpd/models/structsearch_run2/structsearch_run2.phi
tests/testdata/results/tool_databases/structsearch_pkpd/models/structsearch_run2/.pharmpy/metadata.json
tests/testdata/results/tool_databases/structsearch_pkpd/models/structsearch_run2/.pharmpy/results.json
tests/testdata/results/tool_databases/structsearch_pkpd/models/structsearch_run3/nonmem.json
tests/testdata/results/tool_databases/structsearch_pkpd/models/structsearch_run3/pd_sdtab3
tests/testdata/results/tool_databases/structsearch_pkpd/models/structsearch_run3/stderr
tests/testdata/results/tool_databases/structsearch_pkpd/models/structsearch_run3/stdout
tests/testdata/results/tool_databases/structsearch_pkpd/models/structsearch_run3/structsearch_run3.ext
tests/testdata/results/tool_databases/structsearch_pkpd/models/structsearch_run3/structsearch_run3.lst
tests/testdata/results/tool_databases/structsearch_pkpd/models/structsearch_run3/structsearch_run3.mod
tests/testdata/results/tool_databases/structsearch_pkpd/models/structsearch_run3/structsearch_run3.phi
tests/testdata/results/tool_databases/structsearch_pkpd/models/structsearch_run3/.pharmpy/metadata.json
tests/testdata/results/tool_databases/structsearch_pkpd/models/structsearch_run3/.pharmpy/results.json
tests/tools/__init__.py
tests/tools/test_allometry.py
tests/tools/test_amd.py
tests/tools/test_bootstrap.py
tests/tools/test_cdd.py
tests/tools/test_covsearch.py
tests/tools/test_crossval.py
tests/tools/test_estmethod.py
tests/tools/test_exports.py
tests/tools/test_frem.py
tests/tools/test_iivsearch.py
tests/tools/test_iovsearch.py
tests/tools/test_linearize.py
tests/tools/test_mfl.py
tests/tools/test_ml.py
tests/tools/test_modelsearch.py
tests/tools/test_qa.py
tests/tools/test_rankfuncs.py
tests/tools/test_retries.py
tests/tools/test_run.py
tests/tools/test_runtool.py
tests/tools/test_ruvsearch.py
tests/tools/test_scm.py
tests/tools/test_simeval.py
tests/tools/test_start_model.py
tests/tools/test_structsearch.py
tests/tools/test_summarize_individuals.py
tests/tools/test_wrap.py
tests/workflows/test_call.py
tests/workflows/test_execute.py
tests/workflows/test_log.py
tests/workflows/test_model_database.py
tests/workflows/test_model_entry.py
tests/workflows/test_task.py
tests/workflows/test_tool_database.py
tests/workflows/test_workflow.py