MANIFEST.in
README.md
setup.py
pgp_reconstruction/__init__.py
pgp_reconstruction/config.cfg
pgp_reconstruction.egg-info/PKG-INFO
pgp_reconstruction.egg-info/SOURCES.txt
pgp_reconstruction.egg-info/dependency_links.txt
pgp_reconstruction.egg-info/requires.txt
pgp_reconstruction.egg-info/top_level.txt
pgp_reconstruction/cli/download_missing_data.py
pgp_reconstruction/cli/pgprec.py
pgp_reconstruction/data/generated/README.md
pgp_reconstruction/data/input/README.md
pgp_reconstruction/dependencies/README.md
pgp_reconstruction/reconstruction/diamond.py
pgp_reconstruction/reconstruction/findOrfs.py
pgp_reconstruction/reconstruction/findSoftConstraints.py
pgp_reconstruction/reconstruction/makeEssentialRxns.py
pgp_reconstruction/reconstruction/prune_universal_model.py
pgp_reconstruction/reconstruction/scoring.py