README.md
pyproject.toml
setup.cfg
setup.py
src/permedcoe/__init__.py
src/permedcoe/__main__.py
src/permedcoe/base.py
src/permedcoe/bb.py
src/permedcoe.egg-info/PKG-INFO
src/permedcoe.egg-info/SOURCES.txt
src/permedcoe.egg-info/dependency_links.txt
src/permedcoe.egg-info/entry_points.txt
src/permedcoe.egg-info/requires.txt
src/permedcoe.egg-info/top_level.txt
src/permedcoe/core/__init__.py
src/permedcoe/core/building_block.py
src/permedcoe/core/constants.py
src/permedcoe/core/decorators.py
src/permedcoe/core/environment.py
src/permedcoe/core/functions.py
src/permedcoe/templates/application/NextFlow/NextFlow.nf
src/permedcoe/templates/application/NextFlow/launch.sh
src/permedcoe/templates/application/PyCOMPSs/app.py
src/permedcoe/templates/application/PyCOMPSs/launch.sh
src/permedcoe/templates/application/PyCOMPSs/launch_without_pycompss.sh
src/permedcoe/templates/application/SnakeMake/Snakefile
src/permedcoe/templates/application/SnakeMake/launch.sh
src/permedcoe/templates/building_block/skeleton_BB/README.md
src/permedcoe/templates/building_block/skeleton_BB/build.sh
src/permedcoe/templates/building_block/skeleton_BB/clean.sh
src/permedcoe/templates/building_block/skeleton_BB/install.sh
src/permedcoe/templates/building_block/skeleton_BB/install_sc.sh
src/permedcoe/templates/building_block/skeleton_BB/pyproject.toml
src/permedcoe/templates/building_block/skeleton_BB/setup.cfg
src/permedcoe/templates/building_block/skeleton_BB/setup.py
src/permedcoe/templates/building_block/skeleton_BB/uninstall.sh
src/permedcoe/templates/building_block/skeleton_BB/container/create_container.sh
src/permedcoe/templates/building_block/skeleton_BB/container/sample.def
src/permedcoe/templates/building_block/skeleton_BB/src/bb/__init__.py
src/permedcoe/templates/building_block/skeleton_BB/src/bb/__main__.py
src/permedcoe/templates/building_block/skeleton_BB/src/bb/definition.json
src/permedcoe/templates/building_block/skeleton_BB/src/bb/definitions.py
src/permedcoe/templates/building_block/skeleton_BB/src/bb/main.py
src/permedcoe/templates/building_block/skeleton_BB/src/bb/assets/my_binary.sh
src/permedcoe/utils/__init__.py
src/permedcoe/utils/arguments.py
src/permedcoe/utils/artifact.py
src/permedcoe/utils/environ.py
src/permedcoe/utils/exceptions.py
src/permedcoe/utils/executor.py
src/permedcoe/utils/log.py
src/permedcoe/utils/preproc.py
src/permedcoe/utils/user_arguments.py