.gitignore
LICENSE
README.md
gitattributes
peptide_forest_3.py
pyproject.toml
setup.cfg
setup.py
.github/dependabot.yml
.github/workflows/pypi_cd.yml
.github/workflows/tox_ci.yml
config/ursgal_path_dict.json
peptide_forest/__init__.py
peptide_forest/knowledge_base.py
peptide_forest/peptide_forest.py
peptide_forest/prep.py
peptide_forest/results.py
peptide_forest/tools.py
peptide_forest/training.py
peptide_forest/version.txt
peptide_forest.egg-info/PKG-INFO
peptide_forest.egg-info/SOURCES.txt
peptide_forest.egg-info/dependency_links.txt
peptide_forest.egg-info/requires.txt
peptide_forest.egg-info/top_level.txt
tests/__init__.py
tests/conftest.py
tests/test_prep.py
tests/test_results.py
tests/test_training.py
tests/_data/mascot_dat2csv_1_0_0.csv
tests/_data/omssa_2_1_9.csv
tests/_data/path_dict_medium.json
tests/_data/quant_data/quant_data.csv
tests/_data/raw_data/data_without_mscores.csv