LICENSE
MANIFEST.in
README.md
setup.py
pastml/__init__.py
pastml/acr.py
pastml/annotation.py
pastml/file.py
pastml/ml.py
pastml/parsimony.py
pastml/tree.py
pastml.egg-info/PKG-INFO
pastml.egg-info/SOURCES.txt
pastml.egg-info/dependency_links.txt
pastml.egg-info/entry_points.txt
pastml.egg-info/requires.txt
pastml.egg-info/top_level.txt
pastml/../LICENSE
pastml/../README.md
pastml/models/CustomRatesModel.py
pastml/models/EFTModel.py
pastml/models/F81Model.py
pastml/models/HKYModel.py
pastml/models/JCModel.py
pastml/models/JTTModel.py
pastml/models/__init__.py
pastml/models/generator.py
pastml/templates/geo_map.html
pastml/templates/index.html
pastml/templates/pie_tree.js
pastml/templates/pie_tree_simple.js
pastml/templates/time_slider.html
pastml/templates/transitions.js
pastml/templates/css/bootstrap.min.css
pastml/templates/css/jquery.qtip.min.css
pastml/templates/fonts/glyphicons-halflings-regular.eot
pastml/templates/fonts/glyphicons-halflings-regular.svg
pastml/templates/fonts/glyphicons-halflings-regular.ttf
pastml/templates/fonts/glyphicons-halflings-regular.woff
pastml/templates/fonts/glyphicons-halflings-regular.woff2
pastml/templates/js/0.0-jquery.min.js
pastml/templates/js/0.1-jquery.qtip.min.js
pastml/templates/js/1.1-cytoscape.min.js
pastml/templates/js/1.2-cytoscape-qtip.js
pastml/templates/js/1.3-cytoscape-svg.js
pastml/templates/js/1.4-layout-base.min.js
pastml/templates/js/1.5-cose-base.min.js
pastml/templates/js/1.6-cytoscape-cose-bilkent.min.js
pastml/templates/js/bootstrap.min.js
pastml/utilities/__init__.py
pastml/utilities/calculate_changes.py
pastml/utilities/state_simulator.py
pastml/utilities/transition_counter.py
pastml/visualisation/__init__.py
pastml/visualisation/colour_generator.py
pastml/visualisation/cytoscape_manager.py
pastml/visualisation/generate_geomap.py
pastml/visualisation/itol_manager.py
pastml/visualisation/tree_compressor.py