README.md
setup.py
bamboo/__init__.py
bamboo/ccp4_utils.py
bamboo/constants.py
bamboo/rcsb_utils.py
bamboo/common/__init__.py
bamboo/common/colours.py
bamboo/common/command.py
bamboo/common/errors.py
bamboo/common/file.py
bamboo/common/holders.py
bamboo/common/logs.py
bamboo/common/masks.py
bamboo/common/online.py
bamboo/common/parser.py
bamboo/common/path.py
bamboo/common/profile.py
bamboo/common/status.py
bamboo/coot_utils/__init__.py
bamboo/coot_utils/scripts.py
bamboo/coot_utils/utils.py
bamboo/html/__init__.py
bamboo/html/builder.py
bamboo/html/div.py
bamboo/html/section.py
bamboo/maths/__init__.py
bamboo/maths/angles.py
bamboo/plot/__init__.py
bamboo/plot/bar.py
bamboo/plot/radar.py
bamboo/plot/simple.py
bamboo/plot/tree.py
bamboo/pymol_utils/__init__.py
bamboo/pymol_utils/shapes.py
bamboo/rdkit_utils/__init__.py
bamboo/rdkit_utils/mol.py
bamboo/rdkit_utils/smile.py
bamboo/rdkit_utils/bonds/__init__.py
bamboo/rdkit_utils/bonds/dihedral.py
bamboo/rdkit_utils/bonds/fragment.py
bamboo/rdkit_utils/bonds/rotate.py
bamboo/rdkit_utils/contacts/__init__.py
bamboo/rdkit_utils/contacts/utils.py
bamboo/rdkit_utils/coords/__init__.py
bamboo/rdkit_utils/coords/coords.py
bamboo/rdkit_utils/coords/fragment.py
bamboo/rdkit_utils/coords/utils.py
bamboo/regression/__init__.py
bamboo/regression/resources/__init__.py
bamboo/resources/__init__.py
bamboo/stats/__init__.py
bamboo/stats/cluster.py
bamboo/stats/networks.py
bamboo/stats/ospina.py
bamboo/stats/statistical_tests.py
bamboo/stats/utils.py
bamboo/wrappers/__init__.py
bamboo/wrappers/mlfsom.py
bamboo/wrappers/ligand_builders/__init__.py
bamboo/wrappers/ligand_builders/elbow.py
bamboo/wrappers/ligand_builders/grade.py
bamboo/wrappers/ligand_builders/prodrg.py
bamboo/wrappers/ligand_builders/writedict.py
bamboo/wrappers/ligand_fitters/__init__.py
bamboo/wrappers/ligand_fitters/arpwarp.py
bamboo/wrappers/ligand_fitters/flynn.py
bamboo/wrappers/ligand_fitters/ligandfit.py
bamboo/wrappers/ligand_fitters/rhofit.py
bamboo/wrappers/refiners/__init__.py
bamboo/wrappers/refiners/refmac.py
bamboo/xray/__init__.py
bamboo/xray/maps.py
giant/__init__.py
giant/dataset.py
giant/html.py
giant/manager.py
giant/phil.py
giant/graphics/__init__.py
giant/graphics/image_blobs.py
giant/grid/__init__.py
giant/grid/masks.py
giant/grid/utils.py
giant/grid/voronoi.py
giant/io/__init__.py
giant/io/arrays.py
giant/io/pdb.py
giant/jiffies/__init__.py
giant/jiffies/datasets_cluster.py
giant/jiffies/datasets_prepare.py
giant/jiffies/datasets_summary.py
giant/jiffies/make_restraints.py
giant/jiffies/merge_conformations.py
giant/jiffies/multi_table_ones.py
giant/jiffies/quick_insert_f000.py
giant/jiffies/quick_mtz_merge.py
giant/jiffies/quick_mtz_phase_difference.py
giant/jiffies/quick_refine.py
giant/jiffies/quick_refmac.py
giant/jiffies/sanitise_model.py
giant/jiffies/score_model.py
giant/jiffies/score_model_multiple.py
giant/jiffies/score_model_set.py
giant/jiffies/split_conformations.py
giant/ligands/__init__.py
giant/maths/__init__.py
giant/maths/geometry.py
giant/misc/__init__.py
giant/misc/perturb.py
giant/regression/__init__.py
giant/regression/test_scale_data.py
giant/regression/test_sequence.py
giant/regression/tst_grid.py
giant/regression/tst_scale_data.py
giant/regression/tst_sequence.py
giant/resources/__init__.py
giant/resources/download_test_data.py
giant/stats/__init__.py
giant/stats/optimisation.py
giant/structure/__init__.py
giant/structure/align.py
giant/structure/altlocs.py
giant/structure/b_factors.py
giant/structure/common.py
giant/structure/dihedrals.py
giant/structure/ensembles.py
giant/structure/formatting.py
giant/structure/html.py
giant/structure/iterators.py
giant/structure/occupancy.py
giant/structure/pymol.py
giant/structure/select.py
giant/structure/sequence.py
giant/structure/summary.py
giant/structure/tls.py
giant/structure/uij.py
giant/structure/utils.py
giant/structure/motion/__init__.py
giant/structure/motion/tls.py
giant/structure/restraints/__init__.py
giant/structure/restraints/conformers.py
giant/structure/restraints/external.py
giant/structure/restraints/occupancy.py
giant/structure/restraints/peptides.py
giant/templates/__init__.py
giant/xray/__init__.py
giant/xray/edstats.py
giant/xray/refine.py
giant/xray/scaling.py
giant/xray/symmetry.py
giant/xray/tls.py
giant/xray/unit_cell.py
giant/xray/crystal/__init__.py
giant/xray/crystal/cluster.py
giant/xray/data/__init__.py
giant/xray/maps/__init__.py
giant/xray/maps/bdc.py
giant/xray/maps/local_align.py
giant/xray/maps/scale.py
multi_dataset_crystalography/__init__.py
multi_dataset_crystalography/align.py
multi_dataset_crystalography/config.py
multi_dataset_crystalography/constants.py
multi_dataset_crystalography/functional.py
multi_dataset_crystalography/functions.py
multi_dataset_crystalography/pandda_config.py
multi_dataset_crystalography/pandda_phil.py
multi_dataset_crystalography/processor.py
multi_dataset_crystalography/utils.py
multi_dataset_crystalography/dataset/__init__.py
multi_dataset_crystalography/dataset/dataloader.py
multi_dataset_crystalography/dataset/dataset.py
multi_dataset_crystalography/dataset/partitioner.py
multi_dataset_crystalography/dataset/reference.py
multi_dataset_crystalography/dataset/sample_loader.py
multi_dataset_crystalography/dataset/transforms.py
multi_dataset_crystalography/grid/__init__.py
multi_dataset_crystalography/grid/masks.py
multi_dataset_crystalography/grid/utils.py
multi_dataset_crystalography/grid/voronoi.py
multi_dataset_crystalography/structure/__init__.py
multi_dataset_crystalography/structure/align.py
multi_dataset_crystalography/structure/altlocs.py
multi_dataset_crystalography/structure/b_factors.py
multi_dataset_crystalography/structure/common.py
multi_dataset_crystalography/structure/dihedrals.py
multi_dataset_crystalography/structure/ensembles.py
multi_dataset_crystalography/structure/formatting.py
multi_dataset_crystalography/structure/html.py
multi_dataset_crystalography/structure/iterators.py
multi_dataset_crystalography/structure/occupancy.py
multi_dataset_crystalography/structure/pymol.py
multi_dataset_crystalography/structure/select.py
multi_dataset_crystalography/structure/sequence.py
multi_dataset_crystalography/structure/summary.py
multi_dataset_crystalography/structure/tls.py
multi_dataset_crystalography/structure/uij.py
multi_dataset_crystalography/structure/utils.py
multi_dataset_crystalography/structure/motion/__init__.py
multi_dataset_crystalography/structure/motion/tls.py
multi_dataset_crystalography/structure/restraints/__init__.py
multi_dataset_crystalography/structure/restraints/conformers.py
multi_dataset_crystalography/structure/restraints/external.py
multi_dataset_crystalography/structure/restraints/occupancy.py
multi_dataset_crystalography/structure/restraints/peptides.py
pandda_2/__init__.py
pandda_2/autobuild.py
pandda_2/checks.py
pandda_2/cluster_outliers.py
pandda_2/config.py
pandda_2/copy_dataset_files.py
pandda_2/create_event_table.py
pandda_2/create_shells.py
pandda_2/create_sites_table.py
pandda_2/debug.py
pandda_2/define_tree.py
pandda_2/evaluate_model.py
pandda_2/event_analyser.py
pandda_2/filter_clusters.py
pandda_2/fit_model.py
pandda_2/functional.py
pandda_2/get_dataset.py
pandda_2/get_grid.py
pandda_2/get_reference.py
pandda_2/get_reference_map.py
pandda_2/giant_phil.py
pandda_2/graphs.py
pandda_2/load_dataset.py
pandda_2/luigi_sge.py
pandda_2/make_event_map.py
pandda_2/make_event_table.py
pandda_2/make_mean_map.py
pandda_2/make_tree.py
pandda_2/make_z_map.py
pandda_2/map_loader.py
pandda_2/native_map_maker.py
pandda_2/options.py
pandda_2/output.py
pandda_2/output_event_table.py
pandda_2/output_sites_table.py
pandda_2/pandda_phil.py
pandda_2/path.py
pandda_2/process_shell.py
pandda_2/process_shells.py
pandda_2/processor.py
pandda_2/processor_no_luigi.py
pandda_2/standard_pandda.py
pandda_2/statistical_model.py
pandda_2/transform_dataset.py
pandda_2/transforms.py
pandda_2.egg-info/PKG-INFO
pandda_2.egg-info/SOURCES.txt
pandda_2.egg-info/dependency_links.txt
pandda_2.egg-info/requires.txt
pandda_2.egg-info/top_level.txt
pandda_2/pandda_analyse/__init__.py
pandda_2/pandda_analyse/classes.py
pandda_2/pandda_analyse/cluster.py
pandda_2/pandda_analyse/config.py
pandda_2/pandda_analyse/criticise.py
pandda_2/pandda_analyse/event_model.py
pandda_2/pandda_analyse/event_model_distributed.py
pandda_2/pandda_analyse/graphs.py
pandda_2/pandda_analyse/html.py
pandda_2/pandda_analyse/log.py
pandda_2/pandda_analyse/pandda_output.py
pandda_2/pandda_analyse/pandda_phil.py
pandda_inspect/__init__.py
pandda_inspect/constants.py
pandda_inspect/html.py
pandda_inspect/ligands.py
pandda_inspect/resources/__init__.py
pandda_inspect/resources/html.py
pandda_inspect/templates/__init__.py
pandda_inspect/templates/ccp4mg-pic.py