"""
PandaDock: Python Molecular Docking Tool Package
"""

# Import main components
from .protein import Protein
from .ligand import Ligand
from .scoring import (
    ScoringFunction, 
    CompositeScoringFunction,
    EnhancedScoringFunction
)
from .search import RandomSearch, GeneticAlgorithm
from .utils import save_docking_results, calculate_rmsd
from .preparation import prepare_protein, prepare_ligand
from .validation import validate_docking, calculate_ensemble_rmsd

# Import batch screening module
from . import batch_screening

__version__ = '1.3.6'
