README.md
setup.py
pamogk/__init__.py
pamogk/config.py
pamogk/label_mapper.py
pamogk.egg-info/PKG-INFO
pamogk.egg-info/SOURCES.txt
pamogk.egg-info/dependency_links.txt
pamogk.egg-info/requires.txt
pamogk.egg-info/top_level.txt
pamogk/data_processor/__init__.py
pamogk/data_processor/kirc_to_rmkl.py
pamogk/data_processor/kirc_to_vec.py
pamogk/data_processor/node2vec_processor.py
pamogk/data_processor/paradigm_data_prep.py
pamogk/data_processor/rnaseq_processor.py
pamogk/data_processor/synapse_clinical_processor.py
pamogk/data_processor/synapse_rppa_processor.py
pamogk/data_processor/synapse_som_processor.py
pamogk/gene_mapper/__init__.py
pamogk/gene_mapper/uniprot_mapper.py
pamogk/kernels/__init__.py
pamogk/kernels/center_product_kernel.py
pamogk/kernels/lmkkmeans_train.py
pamogk/kernels/main.py
pamogk/kernels/neighbor_walk_kernel.py
pamogk/kernels/new_kernel.py
pamogk/kernels/node2vec_h_i.py
pamogk/kernels/node2vec_h_i_k.py
pamogk/kernels/pairwise_product_max_kernel.py
pamogk/kernels/pamogk.py
pamogk/lib/__init__.py
pamogk/lib/get_node2vec.py
pamogk/lib/kernel_kmeans.py
pamogk/lib/node2vec.py
pamogk/lib/sutils.py
pamogk/pathway_reader/__init__.py
pamogk/pathway_reader/cx_pathway_reader.py
pamogk/pathway_reader/kgml_converter.py
pamogk/pathway_reader/kgml_pathway_reader.py