LICENSE
README.md
pyproject.toml
setup.py
src/palantir/__init__.py
src/palantir/cli.py
src/palantir/config.py
src/palantir/core.py
src/palantir/io.py
src/palantir/plot.py
src/palantir/plot_utils.py
src/palantir/preprocess.py
src/palantir/presults.py
src/palantir/utils.py
src/palantir/validation.py
src/palantir/version.py
src/palantir.egg-info/PKG-INFO
src/palantir.egg-info/SOURCES.txt
src/palantir.egg-info/dependency_links.txt
src/palantir.egg-info/entry_points.txt
src/palantir.egg-info/requires.txt
src/palantir.egg-info/top_level.txt
tests/test_core_run_palantir.py
tests/test_integration.py
tests/test_io.py
tests/test_plot.py
tests/test_preprocess.py
tests/test_presults.py
tests/test_presults_cluster_gene_trends.py
tests/test_presults_compute_gene_trends.py
tests/test_presults_gam_fit_predict.py
tests/test_presults_select_branch_cells.py
tests/test_util_density.py
tests/test_util_run_pca.py
tests/test_utils_compute_kernel.py
tests/test_utils_density_functions.py
tests/test_utils_determine_multiscale_space.py
tests/test_utils_diffusion_maps_from_kernel.py
tests/test_utils_early_cell_functions.py
tests/test_utils_run_diffusion_maps.py
tests/test_utils_run_local_variability.py
tests/test_utils_run_magic_imputation.py
tests/test_validation.py