 Name                       Version      License                               URL                                                                  

 click                      8.2.1        3-Clause BSD License                  https://github.com/pallets/click/                                    
 protobuf                   6.31.1       3-Clause BSD License                  https://developers.google.com/protocol-buffers/                      
 msgpack                    1.1.1        Apache 2.0                            https://msgpack.org/                                                 
 pydeck                     0.9.1        Apache License 2.0                    https://github.com/visgl/deck.gl/tree/master/bindings/pydeck         
 boto3                      1.39.9       Apache Software License               https://github.com/boto/boto3                                        
 botocore                   1.39.9       Apache Software License               https://github.com/boto/botocore                                     
 nextflow                   25.4.6       Apache Software License               UNKNOWN                                                              
 pyarrow                    21.0.0       Apache Software License               https://arrow.apache.org/                                            
 requests                   2.32.4       Apache Software License               https://requests.readthedocs.io                                      
 s3transfer                 0.13.1       Apache Software License               https://github.com/boto/s3transfer                                   
 streamlit                  1.47.0       Apache Software License               https://streamlit.io                                                 
 tenacity                   9.1.2        Apache Software License               https://github.com/jd/tenacity                                       
 tornado                    6.5.1        Apache Software License               http://www.tornadoweb.org/                                           
 tzdata                     2025.2       Apache Software License               https://github.com/python/tzdata                                     
 watchdog                   6.0.0        Apache Software License               https://github.com/gorakhargosh/watchdog                             
 packaging                  25.0         Apache Software License; BSD License  https://github.com/pypa/packaging                                    
 python-dateutil            2.9.0.post0  Apache Software License; BSD License  https://github.com/dateutil/dateutil                                 
 cryptography               45.0.5       Apache-2.0 OR BSD-3-Clause            https://github.com/pyca/cryptography                                 
 Authlib                    1.6.1        BSD License                           https://github.com/authlib/authlib                                   
 GitPython                  3.1.44       BSD License                           https://github.com/gitpython-developers/GitPython                    
 Jinja2                     3.1.6        BSD License                           https://github.com/pallets/jinja/                                    
 MarkupSafe                 3.0.2        BSD License                           https://github.com/pallets/markupsafe/                               
 Pygments                   2.19.2       BSD License                           https://pygments.org                                                 
 altair                     5.5.0        BSD License                           https://github.com/vega/altair                                       
 biopandas                  0.5.1        BSD License                           https://github.com/rasbt/biopandas                                   
 cmap                       0.6.2        BSD License                           https://github.com/pyapp-kit/cmap                                    
 gitdb                      4.0.12       BSD License                           https://github.com/gitpython-developers/gitdb                        
 idna                       3.10         BSD License                           https://github.com/kjd/idna                                          
 numpy                      2.3.1        BSD License                           https://numpy.org
 pandas                     2.3.1        BSD License                           https://pandas.pydata.org                                            
 psutil                     7.0.0        BSD License                           https://github.com/giampaolo/psutil                                  
 pycparser                  2.22         BSD License                           https://github.com/eliben/pycparser                                  
 python-dotenv              1.1.1        BSD License                           https://github.com/theskumar/python-dotenv                           
 scipy                      1.16.0       BSD License                           https://scipy.org/                                                   
 smmap                      5.0.2        BSD License                           https://github.com/gitpython-developers/smmap                        
 biopython                  1.85         Freely Distributable                  https://biopython.org/
 shellingham                1.5.4        ISC License (ISCL)                    https://github.com/sarugaku/shellingham                              
 SQLAlchemy                 2.0.41       MIT                                   https://www.sqlalchemy.org                                           
 rpds-py                    0.26.0       MIT                                   https://github.com/crate-py/rpds                                     
 timeago                    1.0.16       MIT                                   https://github.com/hustcc/timeago                                    
 PyYAML                     6.0.2        MIT License                           https://pyyaml.org/
 annotated-types            0.7.0        MIT License                           https://github.com/annotated-types/annotated-types                   
 appdirs                    1.4.4        MIT License                           http://github.com/ActiveState/appdirs                                
 attrs                      25.3.0       MIT License                           https://www.attrs.org/en/stable/changelog.html                       
 blinker                    1.9.0        MIT License                           https://github.com/pallets-eco/blinker/                              
 cachetools                 6.1.0        MIT License                           https://github.com/tkem/cachetools/                                  
 cffi                       1.17.1       MIT License                           http://cffi.readthedocs.org                                          
 charset-normalizer         3.4.2        MIT License                           https://github.com/jawah/charset_normalizer/blob/master/CHANGELOG.md 
 humanize                   4.12.3       MIT License                           https://github.com/python-humanize/humanize                          
 jmespath                   1.0.1        MIT License                           https://github.com/jmespath/jmespath.py                              
 markdown-it-py             3.0.0        MIT License                           https://github.com/executablebooks/markdown-it-py                    
 mdurl                      0.1.2        MIT License                           https://github.com/executablebooks/mdurl                             
 mmtf-python                1.1.3        MIT License                           https://github.com/rcsb/mmtf-python.git                              
 mypy-boto3                 1.39.0       MIT License                           https://github.com/youtype/mypy_boto3_builder                        
 mypy-boto3-omics           1.39.0       MIT License                           https://github.com/youtype/mypy_boto3_builder                        
 mypy-boto3-s3              1.39.5       MIT License                           https://github.com/youtype/mypy_boto3_builder                        
 mypy-boto3-stepfunctions   1.39.8       MIT License                           https://github.com/youtype/mypy_boto3_builder                        
 narwhals                   1.48.0       MIT License                           https://github.com/narwhals-dev/narwhals                             
 plotly                     6.2.0        MIT License                           https://plotly.com/python/                                           
 pydantic                   2.11.7       MIT License                           https://github.com/pydantic/pydantic                                 
 pydantic-settings          2.10.1       MIT License                           https://github.com/pydantic/pydantic-settings                        
 pydantic_core              2.33.2       MIT License                           https://github.com/pydantic/pydantic-core                            
 pytz                       2025.2       MIT License                           http://pythonhosted.org/pytz                                         
 rich                       14.0.0       MIT License                           https://github.com/Textualize/rich                                   
 six                        1.17.0       MIT License                           https://github.com/benjaminp/six                                     
 toml                       0.10.2       MIT License                           https://github.com/uiri/toml                                         
 typer                      0.16.0       MIT License                           https://github.com/fastapi/typer                                     
 pillow                     11.3.0       MIT-CMU License                       https://python-pillow.github.io                                      
 jsonschema                 4.25.0       MIT license                           https://github.com/python-jsonschema/jsonschema                      
 jsonschema-specifications  2025.4.1     MIT license                           https://github.com/python-jsonschema/jsonschema-specifications       
 referencing                0.36.2       MIT license                           https://github.com/python-jsonschema/referencing                     
 streamlit-js-eval          0.1.7        MIT license                           https://github.com/aghasemi/streamlit_js_eval
 streamlit-timeago          0.1.2        MIT license                           https://github.com/prihoda/streamlit-timeago                         
 typing-inspection          0.4.1        MIT license                           https://github.com/pydantic/typing-inspection                        
 urllib3                    2.5.0        MIT license                           https://github.com/urllib3/urllib3/blob/main/                        
 certifi                    2025.7.14    Mozilla Public License 2.0 (MPL 2.0)  https://github.com/certifi/python-certifi                            
 typing_extensions          4.14.1       PSF License Version 2                 https://github.com/python/typing_extensions                          
 looseversion               1.1.2        Python Software Foundation License    https://github.com/effigies/looseversion          
