from openbiolink.edgeType import EdgeType
from openbiolink.graph_creation.metadata_infile.infileMetadata import InfileMetadata
from openbiolink.graph_creation.types.infileType import InfileType
from openbiolink.namespace import *
from openbiolink.nodeType import NodeType


class InMetaEdgeGo(InfileMetadata):
    CSV_NAME = "DB_GO_annotations.csv"
    USE_COLS = ["DOI", "GO_ID", "evidence_code"]
    NODE1_COL = 0
    NODE2_COL = 1
    QSCORE_COL = 2
    SOURCE = "GO"
    NODE1_TYPE = NodeType.GENE
    NODE1_NAMESPACE = Namespace(Namespaces.UNIPROT, False)
    NODE2_TYPE = NodeType.GO
    NODE2_NAMESPACE = Namespace(Namespaces.GO)
    EDGE_TYPE = EdgeType.GENE_GO
    INFILE_TYPE = InfileType.IN_EDGE_GO
    MAPPING_SEP = None

    def __init__(self):
        super().__init__(csv_name=InMetaEdgeGo.CSV_NAME, cols=self.USE_COLS, infileType=InMetaEdgeGo.INFILE_TYPE)
