# This file was autogenerated by uv via the following command:
#    uv pip compile pyproject.toml -o requirements.txt --constraint constraints.txt
aiohappyeyeballs==2.6.1
    # via aiohttp
aiohttp==3.11.18
    # via omnibenchmark (pyproject.toml)
aiosignal==1.3.2
    # via aiohttp
annotated-types==0.7.0
    # via pydantic
appdirs==1.4.4
    # via snakemake
argparse-dataclass==2.0.0
    # via
    #   snakemake-interface-common
    #   snakemake-interface-executor-plugins
async==0.6.2
    # via omnibenchmark (pyproject.toml)
attrs==25.3.0
    # via
    #   aiohttp
    #   jsonschema
    #   referencing
certifi==2025.1.31
    # via requests
charset-normalizer==3.4.1
    # via requests
click==8.1.8
    # via
    #   omnibenchmark (pyproject.toml)
    #   json-flattener
    #   linkml-runtime
    #   prefixcommons
conda-inject==1.3.2
    # via snakemake
configargparse==1.7
    # via
    #   snakemake
    #   snakemake-interface-common
connection-pool==0.0.3
    # via snakemake
contourpy==1.3.2
    # via matplotlib
curies==0.10.12
    # via
    #   linkml-runtime
    #   prefixmaps
cycler==0.12.1
    # via matplotlib
datrie==0.8.2
    # via snakemake
deprecated==1.2.18
    # via linkml-runtime
docutils==0.21.2
    # via snakemake
dpath==2.2.0
    # via
    #   snakemake
    #   yte
easybuild==5.0.0
    # via omnibenchmark (pyproject.toml)
easybuild-easyblocks==5.0.0
    # via
    #   omnibenchmark (pyproject.toml)
    #   easybuild
easybuild-easyconfigs==5.0.0
    # via easybuild
easybuild-framework==5.0.0
    # via easybuild
fastjsonschema==2.21.1
    # via nbformat
filelock==3.18.0
    # via omnibenchmark (pyproject.toml)
fonttools==4.57.0
    # via matplotlib
frozenlist==1.6.0
    # via
    #   aiohttp
    #   aiosignal
gitdb==4.0.12
    # via gitpython
gitpython==3.1.44
    # via
    #   omnibenchmark (pyproject.toml)
    #   snakemake
hbreader==0.9.1
    # via
    #   jsonasobj2
    #   linkml-runtime
humanfriendly==10.0
    # via
    #   omnibenchmark (pyproject.toml)
    #   snakemake
idna==3.10
    # via
    #   requests
    #   yarl
immutables==0.21
    # via snakemake
iniconfig==2.1.0
    # via pytest
isodate==0.7.2
    # via linkml-runtime
jinja2==3.1.6
    # via snakemake
json-flattener==0.1.9
    # via linkml-runtime
jsonasobj2==1.0.4
    # via linkml-runtime
jsonschema==4.23.0
    # via
    #   linkml-runtime
    #   nbformat
    #   snakemake
jsonschema-specifications==2024.10.1
    # via jsonschema
jupyter-core==5.7.2
    # via nbformat
kiwisolver==1.4.8
    # via matplotlib
linkml-runtime==1.9.1
    # via omni-schema
markupsafe==3.0.2
    # via jinja2
matplotlib==3.8.0
    # via omnibenchmark (pyproject.toml)
multidict==6.4.3
    # via
    #   aiohttp
    #   yarl
nbformat==5.10.4
    # via snakemake
networkx==3.4.2
    # via omnibenchmark (pyproject.toml)
numpy==1.26.4
    # via
    #   contourpy
    #   matplotlib
    #   pandas
    #   snakemake-executor-plugin-slurm
omni-schema==0.0.6
    # via omnibenchmark (pyproject.toml)
packaging==25.0
    # via
    #   matplotlib
    #   pytest
    #   snakemake
pandas==2.2.3
    # via snakemake-executor-plugin-slurm
pillow==11.2.1
    # via matplotlib
plac==1.4.5
    # via yte
platformdirs==4.3.7
    # via jupyter-core
pluggy==1.5.0
    # via pytest
prefixcommons==0.1.12
    # via linkml-runtime
prefixmaps==0.2.6
    # via linkml-runtime
propcache==0.3.1
    # via
    #   aiohttp
    #   yarl
psutil==7.0.0
    # via snakemake
pulp==2.9.0
    # via snakemake
pydantic==2.11.3
    # via
    #   omnibenchmark (pyproject.toml)
    #   curies
    #   linkml-runtime
pydantic-core==2.33.1
    # via pydantic
pydot==3.0.4
    # via omnibenchmark (pyproject.toml)
pyparsing==3.2.3
    # via
    #   matplotlib
    #   pydot
    #   rdflib
pytest==8.3.5
    # via pytest-logging
pytest-logging==2015.11.4
    # via prefixcommons
python-dateutil==2.9.0.post0
    # via
    #   omnibenchmark (pyproject.toml)
    #   matplotlib
    #   pandas
pytrie==0.4.0
    # via curies
pytz==2025.2
    # via pandas
pyyaml==6.0.2
    # via
    #   omnibenchmark (pyproject.toml)
    #   conda-inject
    #   json-flattener
    #   linkml-runtime
    #   prefixcommons
    #   prefixmaps
    #   snakemake
    #   yte
rdflib==7.1.4
    # via linkml-runtime
referencing==0.36.2
    # via
    #   jsonschema
    #   jsonschema-specifications
requests==2.32.3
    # via
    #   omnibenchmark (pyproject.toml)
    #   linkml-runtime
    #   prefixcommons
    #   snakemake
reretry==0.11.8
    # via
    #   snakemake
    #   snakemake-interface-storage-plugins
rpds-py==0.24.0
    # via
    #   jsonschema
    #   referencing
six==1.17.0
    # via python-dateutil
smart-open==7.1.0
    # via snakemake
smmap==5.0.2
    # via gitdb
snakemake==8.25.1
    # via
    #   -c constraints.txt
    #   omnibenchmark (pyproject.toml)
snakemake-executor-plugin-slurm==1.6.0
    # via omnibenchmark (pyproject.toml)
snakemake-executor-plugin-slurm-jobstep==0.3.0
    # via snakemake-executor-plugin-slurm
snakemake-interface-common==1.17.4
    # via
    #   snakemake
    #   snakemake-executor-plugin-slurm
    #   snakemake-executor-plugin-slurm-jobstep
    #   snakemake-interface-executor-plugins
    #   snakemake-interface-report-plugins
    #   snakemake-interface-storage-plugins
snakemake-interface-executor-plugins==9.3.5
    # via
    #   snakemake
    #   snakemake-executor-plugin-slurm
    #   snakemake-executor-plugin-slurm-jobstep
snakemake-interface-report-plugins==1.1.0
    # via snakemake
snakemake-interface-storage-plugins==3.5.0
    # via snakemake
sortedcontainers==2.4.0
    # via pytrie
spdx-license-list==3.26.0
    # via omnibenchmark (pyproject.toml)
tabulate==0.9.0
    # via snakemake
throttler==1.2.2
    # via
    #   snakemake
    #   snakemake-executor-plugin-slurm
    #   snakemake-interface-executor-plugins
    #   snakemake-interface-storage-plugins
tqdm==4.67.1
    # via omnibenchmark (pyproject.toml)
traitlets==5.14.3
    # via
    #   jupyter-core
    #   nbformat
typing-extensions==4.13.2
    # via
    #   curies
    #   pydantic
    #   pydantic-core
    #   referencing
    #   typing-inspection
typing-inspection==0.4.0
    # via pydantic
tzdata==2025.2
    # via pandas
urllib3==2.4.0
    # via requests
wrapt==1.17.2
    # via
    #   deprecated
    #   smart-open
    #   snakemake
    #   snakemake-interface-storage-plugins
yarl==1.20.0
    # via aiohttp
yte==1.7.0
    # via snakemake
