MANIFEST.in
README.md
setup.py
oligoss/__init__.py
oligoss/__main__.py
oligoss.egg-info/PKG-INFO
oligoss.egg-info/SOURCES.txt
oligoss.egg-info/dependency_links.txt
oligoss.egg-info/entry_points.txt
oligoss.egg-info/requires.txt
oligoss.egg-info/top_level.txt
oligoss/extractors/__init__.py
oligoss/extractors/data_extraction.py
oligoss/extractors/extractor_classes.py
oligoss/extractors/filters.py
oligoss/extractors/spectra_processing.py
oligoss/postprocessing/__init__.py
oligoss/postprocessing/postprocess.py
oligoss/postprocessing/postprocess_helpers.py
oligoss/silico/__init__.py
oligoss/silico/ms1_silico.py
oligoss/silico/ms2_silico.py
oligoss/silico/silico_handler.py
oligoss/silico/helpers/__init__.py
oligoss/silico/helpers/helpers.py
oligoss/silico/polymer_info/__init__.py
oligoss/silico/polymer_info/polymer.py
oligoss/utils/__init__.py
oligoss/utils/errors.py
oligoss/utils/file_io.py
oligoss/utils/global_chemical_constants.py
oligoss/utils/run_utils.py
oligoss/utils/instrument_standards/__init__.py
oligoss/utils/instrument_standards/fragmentation_methods.py
oligoss/utils/instrument_standards/chromatography/__init__.py
oligoss/utils/instrument_standards/chromatography/c18.json
oligoss/utils/instrument_standards/mass_spec_models/__init__.py
oligoss/utils/instrument_standards/mass_spec_models/orbitrap_lumos_tribrid.JSON
oligoss/utils/logging_utils/__init__.py
oligoss/utils/logging_utils/logger_utils.py
oligoss/utils/parameter_handlers/__init__.py
oligoss/utils/parameter_handlers/instrument_handlers.py
oligoss/utils/parameter_handlers/parameter_handlers.py
oligoss/utils/parameter_handlers/parameters.py
oligoss/utils/parameter_handlers/polymer_param_handlers.py
oligoss/utils/polymer_configs/__init__.py
oligoss/utils/polymer_configs/depsipeptide.json
oligoss/utils/polymer_configs/polyester.json
oligoss/utils/silico_utils/__init__.py
oligoss/utils/silico_utils/silico_utils.py
oligoss/utils/type_dicts/__init__.py
oligoss/utils/type_dicts/parameter_fallbacks.py
oligoss/utils/type_dicts/parameter_type_dicts.py
oligoss/workflows/__init__.py
oligoss/workflows/workflows.py
oligoss/workflows/workflow_helpers/__init__.py
oligoss/workflows/workflow_helpers/linux_workflows.py
oligoss/workflows/workflow_helpers/windows_workflows.py
oligoss/workflows/workflow_helpers/workflow_helpers.py
tests/__init__.py
tests/extractors/__init__.py
tests/extractors/test_data_extraction.py
tests/extractors/test_filters.py
tests/extractors/test_spectra_processing.py
tests/instrument_handlers/__init__.py
tests/instrument_handlers/test_instrument_defaults.py
tests/parameter_handlers/__init__.py
tests/parameter_handlers/test_extractors_parameters.py
tests/parameter_handlers/test_silico_parameters.py
tests/postprocessing/__init__.py
tests/postprocessing/test_postprocess_helpers.py
tests/silico/__init__.py
tests/silico/test_ms1_silico.py
tests/silico/test_ms2_silico.py
tests/silico/test_silico_monomer.py
tests/silico/test_silico_polymer.py
tests/silico/helpers/__init__.py
tests/silico/helpers/test_silico_helpers.py
tests/workflows/__init__.py