LICENSE
MANIFEST.in
README.md
example_expanded_amino_acid_alphabet.txt
pyproject.toml
olga/__init__.py
olga/compute_pgen.py
olga/generate_sequences.py
olga/generation_probability.py
olga/load_model.py
olga/preprocess_generative_model_and_data.py
olga/sequence_generation.py
olga/utils.py
olga.egg-info/PKG-INFO
olga.egg-info/SOURCES.txt
olga.egg-info/dependency_links.txt
olga.egg-info/entry_points.txt
olga.egg-info/not-zip-safe
olga.egg-info/requires.txt
olga.egg-info/top_level.txt
olga/default_models/human_B_heavy/J_gene_CDR3_anchors.csv
olga/default_models/human_B_heavy/V_gene_CDR3_anchors.csv
olga/default_models/human_B_heavy/model_marginals.txt
olga/default_models/human_B_heavy/model_params.txt
olga/default_models/human_B_kappa/J_gene_CDR3_anchors.csv
olga/default_models/human_B_kappa/V_gene_CDR3_anchors.csv
olga/default_models/human_B_kappa/model_marginals.txt
olga/default_models/human_B_kappa/model_params.txt
olga/default_models/human_B_lambda/J_gene_CDR3_anchors.csv
olga/default_models/human_B_lambda/V_gene_CDR3_anchors.csv
olga/default_models/human_B_lambda/model_marginals.txt
olga/default_models/human_B_lambda/model_params.txt
olga/default_models/human_T_alpha/J_gene_CDR3_anchors.csv
olga/default_models/human_T_alpha/V_gene_CDR3_anchors.csv
olga/default_models/human_T_alpha/model_marginals.txt
olga/default_models/human_T_alpha/model_params.txt
olga/default_models/human_T_beta/J_gene_CDR3_anchors.csv
olga/default_models/human_T_beta/V_gene_CDR3_anchors.csv
olga/default_models/human_T_beta/model_marginals.txt
olga/default_models/human_T_beta/model_params.txt
olga/default_models/mouse_B_heavy/J_gene_CDR3_anchors.csv
olga/default_models/mouse_B_heavy/V_gene_CDR3_anchors.csv
olga/default_models/mouse_B_heavy/model_marginals.txt
olga/default_models/mouse_B_heavy/model_params.txt
olga/default_models/mouse_B_kappa/J_gene_CDR3_anchors.csv
olga/default_models/mouse_B_kappa/V_gene_CDR3_anchors.csv
olga/default_models/mouse_B_kappa/model_marginals.txt
olga/default_models/mouse_B_kappa/model_params.txt
olga/default_models/mouse_B_lambda/J_gene_CDR3_anchors.csv
olga/default_models/mouse_B_lambda/V_gene_CDR3_anchors.csv
olga/default_models/mouse_B_lambda/model_marginals.txt
olga/default_models/mouse_B_lambda/model_params.txt
olga/default_models/mouse_T_alpha/J_gene_CDR3_anchors.csv
olga/default_models/mouse_T_alpha/V_gene_CDR3_anchors.csv
olga/default_models/mouse_T_alpha/model_marginals.txt
olga/default_models/mouse_T_alpha/model_params.txt
olga/default_models/mouse_T_beta/J_gene_CDR3_anchors.csv
olga/default_models/mouse_T_beta/V_gene_CDR3_anchors.csv
olga/default_models/mouse_T_beta/model_marginals.txt
olga/default_models/mouse_T_beta/model_params.txt
olga/performance/__init__.py
olga/performance/fast_pgen.py
olga/performance/kernels.py
scripts/compare_pgen_values_with_ulp.py
tests/conftest.py
tests/test_fast_pgen.py
tests/test_generation_probability.py
tests/test_load_model.py
tests/test_sequence_generation.py
tests/test_utils.py