CMakeLists.txt
MANIFEST.in
README.md
description.rst
legal.txt
peru.yaml
requirements.txt
setup.cfg
setup.py
version.txt
bindings/python/CMakeLists.txt
bindings/python/aa.py
bindings/python/example_opt_vr.py.bak
bindings/python/oineus.cpp
bindings/python/oineus_cells.cpp
bindings/python/oineus_common.cpp
bindings/python/oineus_decomposition.cpp
bindings/python/oineus_diagram.cpp
bindings/python/oineus_filtration.cpp
bindings/python/oineus_functions.cpp
bindings/python/oineus_kicr.cpp
bindings/python/oineus_persistence_bindings.h
bindings/python/oineus_top_optimizer.cpp
bindings/python/setup.py
bindings/python/tanishq_manual_matching.py
bindings/python/vectorizer.h
bindings/python/visualize_critical_set_vr.py
bindings/python/oineus/__init__.py
bindings/python/oineus.egg-info/PKG-INFO
bindings/python/oineus.egg-info/SOURCES.txt
bindings/python/oineus.egg-info/dependency_links.txt
bindings/python/oineus.egg-info/not-zip-safe
bindings/python/oineus.egg-info/requires.txt
bindings/python/oineus.egg-info/top_level.txt
bindings/python/oineus/diff/__init__.py
bindings/python/pybind11/.appveyor.yml
bindings/python/pybind11/.clang-format
bindings/python/pybind11/.clang-tidy
bindings/python/pybind11/.cmake-format.yaml
bindings/python/pybind11/.codespell-ignore-lines
bindings/python/pybind11/.gitattributes
bindings/python/pybind11/.gitignore
bindings/python/pybind11/.pre-commit-config.yaml
bindings/python/pybind11/.readthedocs.yml
bindings/python/pybind11/CMakeLists.txt
bindings/python/pybind11/LICENSE
bindings/python/pybind11/MANIFEST.in
bindings/python/pybind11/README.rst
bindings/python/pybind11/SECURITY.md
bindings/python/pybind11/noxfile.py
bindings/python/pybind11/pyproject.toml
bindings/python/pybind11/setup.cfg
bindings/python/pybind11/setup.py
bindings/python/pybind11/.github/CODEOWNERS
bindings/python/pybind11/.github/CONTRIBUTING.md
bindings/python/pybind11/.github/dependabot.yml
bindings/python/pybind11/.github/labeler.yml
bindings/python/pybind11/.github/labeler_merged.yml
bindings/python/pybind11/.github/pull_request_template.md
bindings/python/pybind11/.github/ISSUE_TEMPLATE/bug-report.yml
bindings/python/pybind11/.github/ISSUE_TEMPLATE/config.yml
bindings/python/pybind11/.github/matchers/pylint.json
bindings/python/pybind11/.github/workflows/ci.yml
bindings/python/pybind11/.github/workflows/configure.yml
bindings/python/pybind11/.github/workflows/format.yml
bindings/python/pybind11/.github/workflows/labeler.yml
bindings/python/pybind11/.github/workflows/pip.yml
bindings/python/pybind11/.github/workflows/upstream.yml
bindings/python/pybind11/include/pybind11/attr.h
bindings/python/pybind11/include/pybind11/buffer_info.h
bindings/python/pybind11/include/pybind11/cast.h
bindings/python/pybind11/include/pybind11/chrono.h
bindings/python/pybind11/include/pybind11/common.h
bindings/python/pybind11/include/pybind11/complex.h
bindings/python/pybind11/include/pybind11/eigen.h
bindings/python/pybind11/include/pybind11/embed.h
bindings/python/pybind11/include/pybind11/eval.h
bindings/python/pybind11/include/pybind11/functional.h
bindings/python/pybind11/include/pybind11/gil.h
bindings/python/pybind11/include/pybind11/iostream.h
bindings/python/pybind11/include/pybind11/numpy.h
bindings/python/pybind11/include/pybind11/operators.h
bindings/python/pybind11/include/pybind11/options.h
bindings/python/pybind11/include/pybind11/pybind11.h
bindings/python/pybind11/include/pybind11/pytypes.h
bindings/python/pybind11/include/pybind11/stl.h
bindings/python/pybind11/include/pybind11/stl_bind.h
bindings/python/pybind11/include/pybind11/type_caster_pyobject_ptr.h
bindings/python/pybind11/include/pybind11/detail/class.h
bindings/python/pybind11/include/pybind11/detail/common.h
bindings/python/pybind11/include/pybind11/detail/descr.h
bindings/python/pybind11/include/pybind11/detail/init.h
bindings/python/pybind11/include/pybind11/detail/internals.h
bindings/python/pybind11/include/pybind11/detail/type_caster_base.h
bindings/python/pybind11/include/pybind11/detail/typeid.h
bindings/python/pybind11/include/pybind11/eigen/common.h
bindings/python/pybind11/include/pybind11/eigen/matrix.h
bindings/python/pybind11/include/pybind11/eigen/tensor.h
bindings/python/pybind11/include/pybind11/stl/filesystem.h
bindings/python/pybind11/pybind11/__init__.py
bindings/python/pybind11/pybind11/__main__.py
bindings/python/pybind11/pybind11/_version.py
bindings/python/pybind11/pybind11/commands.py
bindings/python/pybind11/pybind11/py.typed
bindings/python/pybind11/pybind11/setup_helpers.py
bindings/python/pybind11/tools/FindCatch.cmake
bindings/python/pybind11/tools/FindEigen3.cmake
bindings/python/pybind11/tools/FindPythonLibsNew.cmake
bindings/python/pybind11/tools/JoinPaths.cmake
bindings/python/pybind11/tools/check-style.sh
bindings/python/pybind11/tools/cmake_uninstall.cmake.in
bindings/python/pybind11/tools/codespell_ignore_lines_from_errors.py
bindings/python/pybind11/tools/libsize.py
bindings/python/pybind11/tools/make_changelog.py
bindings/python/pybind11/tools/pybind11.pc.in
bindings/python/pybind11/tools/pybind11Common.cmake
bindings/python/pybind11/tools/pybind11Config.cmake.in
bindings/python/pybind11/tools/pybind11NewTools.cmake
bindings/python/pybind11/tools/pybind11Tools.cmake
bindings/python/pybind11/tools/pyproject.toml
bindings/python/pybind11/tools/setup_global.py.in
bindings/python/pybind11/tools/setup_main.py.in
doc/tutorial.md
doc/tutorial_arr.md
doc/tutorial_oop.md
extern/timer.h
extern/hera/common.h
extern/hera/wasserstein.h
extern/hera/wasserstein_pure_geom.hpp
extern/hera/common/diagram_point.h
extern/hera/common/diagram_reader.h
extern/hera/common/diagram_traits.h
extern/hera/common/hash_combine.h
extern/hera/common/infinity.h
extern/hera/common/point.h
extern/hera/dnn/utils.h
extern/hera/dnn/geometry/euclidean-dynamic.h
extern/hera/dnn/geometry/euclidean-fixed.h
extern/hera/dnn/local/kd-tree.h
extern/hera/dnn/local/kd-tree.hpp
extern/hera/dnn/local/search-functors.h
extern/hera/dnn/parallel/tbb.h
extern/hera/dnn/parallel/utils.h
extern/hera/wasserstein/auction_oracle.h
extern/hera/wasserstein/auction_oracle_base.h
extern/hera/wasserstein/auction_oracle_base.hpp
extern/hera/wasserstein/auction_oracle_kdtree_pure_geom.h
extern/hera/wasserstein/auction_oracle_kdtree_pure_geom.hpp
extern/hera/wasserstein/auction_oracle_kdtree_restricted.h
extern/hera/wasserstein/auction_oracle_kdtree_restricted.hpp
extern/hera/wasserstein/auction_oracle_lazy_heap.h
extern/hera/wasserstein/auction_oracle_lazy_heap.hpp
extern/hera/wasserstein/auction_params.h
extern/hera/wasserstein/auction_result.h
extern/hera/wasserstein/auction_runner_gs.h
extern/hera/wasserstein/auction_runner_gs.hpp
extern/hera/wasserstein/auction_runner_jac.h
extern/hera/wasserstein/auction_runner_jac.hpp
extern/hera/wasserstein/basic_defs_ws.h
extern/hera/wasserstein/basic_defs_ws.hpp
extern/hera/wasserstein/def_debug_ws.h
extern/hera/wasserstein/diagonal_heap.h
extern/hera/wasserstein/catch/catch.hpp
extern/icecream/LICENSE.txt
extern/icecream/icecream.hpp
extern/opts/include/opts/opts.h
extern/spdlog/async.h
extern/spdlog/async_logger.h
extern/spdlog/common.h
extern/spdlog/formatter.h
extern/spdlog/logger.h
extern/spdlog/spdlog.h
extern/spdlog/tweakme.h
extern/spdlog/version.h
extern/spdlog/details/async_logger_impl.h
extern/spdlog/details/circular_q.h
extern/spdlog/details/console_globals.h
extern/spdlog/details/file_helper.h
extern/spdlog/details/fmt_helper.h
extern/spdlog/details/log_msg.h
extern/spdlog/details/logger_impl.h
extern/spdlog/details/mpmc_blocking_q.h
extern/spdlog/details/null_mutex.h
extern/spdlog/details/os.h
extern/spdlog/details/pattern_formatter.h
extern/spdlog/details/periodic_worker.h
extern/spdlog/details/registry.h
extern/spdlog/details/thread_pool.h
extern/spdlog/fmt/bin_to_hex.h
extern/spdlog/fmt/fmt.h
extern/spdlog/fmt/ostr.h
extern/spdlog/fmt/bundled/LICENSE.rst
extern/spdlog/fmt/bundled/chrono.h
extern/spdlog/fmt/bundled/color.h
extern/spdlog/fmt/bundled/core.h
extern/spdlog/fmt/bundled/format-inl.h
extern/spdlog/fmt/bundled/format.h
extern/spdlog/fmt/bundled/locale.h
extern/spdlog/fmt/bundled/ostream.h
extern/spdlog/fmt/bundled/posix.h
extern/spdlog/fmt/bundled/printf.h
extern/spdlog/fmt/bundled/ranges.h
extern/spdlog/fmt/bundled/time.h
extern/spdlog/sinks/android_sink.h
extern/spdlog/sinks/ansicolor_sink.h
extern/spdlog/sinks/base_sink.h
extern/spdlog/sinks/basic_file_sink.h
extern/spdlog/sinks/daily_file_sink.h
extern/spdlog/sinks/dist_sink.h
extern/spdlog/sinks/msvc_sink.h
extern/spdlog/sinks/null_sink.h
extern/spdlog/sinks/ostream_sink.h
extern/spdlog/sinks/rotating_file_sink.h
extern/spdlog/sinks/sink.h
extern/spdlog/sinks/stdout_color_sinks.h
extern/spdlog/sinks/stdout_sinks.h
extern/spdlog/sinks/syslog_sink.h
extern/spdlog/sinks/wincolor_sink.h
extern/taskflow/LICENSE
extern/taskflow/taskflow.hpp
extern/taskflow/algorithm/data_pipeline.hpp
extern/taskflow/algorithm/find.hpp
extern/taskflow/algorithm/for_each.hpp
extern/taskflow/algorithm/launch.hpp
extern/taskflow/algorithm/partitioner.hpp
extern/taskflow/algorithm/pipeline.hpp
extern/taskflow/algorithm/reduce.hpp
extern/taskflow/algorithm/scan.hpp
extern/taskflow/algorithm/sort.hpp
extern/taskflow/algorithm/transform.hpp
extern/taskflow/core/async.hpp
extern/taskflow/core/async_task.hpp
extern/taskflow/core/atomic_notifier.hpp
extern/taskflow/core/declarations.hpp
extern/taskflow/core/environment.hpp
extern/taskflow/core/error.hpp
extern/taskflow/core/executor.hpp
extern/taskflow/core/flow_builder.hpp
extern/taskflow/core/freelist.hpp
extern/taskflow/core/graph.hpp
extern/taskflow/core/nonblocking_notifier.hpp
extern/taskflow/core/observer.hpp
extern/taskflow/core/semaphore.hpp
extern/taskflow/core/task.hpp
extern/taskflow/core/taskflow.hpp
extern/taskflow/core/topology.hpp
extern/taskflow/core/tsq.hpp
extern/taskflow/core/worker.hpp
extern/taskflow/cuda/cuda_capturer.hpp
extern/taskflow/cuda/cuda_device.hpp
extern/taskflow/cuda/cuda_error.hpp
extern/taskflow/cuda/cuda_execution_policy.hpp
extern/taskflow/cuda/cuda_graph.hpp
extern/taskflow/cuda/cuda_memory.hpp
extern/taskflow/cuda/cuda_meta.hpp
extern/taskflow/cuda/cuda_object.hpp
extern/taskflow/cuda/cuda_optimizer.hpp
extern/taskflow/cuda/cuda_stream.hpp
extern/taskflow/cuda/cuda_task.hpp
extern/taskflow/cuda/cudaflow.hpp
extern/taskflow/cuda/algorithm/find.hpp
extern/taskflow/cuda/algorithm/for_each.hpp
extern/taskflow/cuda/algorithm/matmul.hpp
extern/taskflow/cuda/algorithm/merge.hpp
extern/taskflow/cuda/algorithm/reduce.hpp
extern/taskflow/cuda/algorithm/scan.hpp
extern/taskflow/cuda/algorithm/sort.hpp
extern/taskflow/cuda/algorithm/transform.hpp
extern/taskflow/cuda/algorithm/transpose.hpp
extern/taskflow/dsl/connection.hpp
extern/taskflow/dsl/dsl.hpp
extern/taskflow/dsl/meta_macro.hpp
extern/taskflow/dsl/task_analyzer.hpp
extern/taskflow/dsl/task_dsl.hpp
extern/taskflow/dsl/task_trait.hpp
extern/taskflow/dsl/tuple_utils.hpp
extern/taskflow/dsl/type_list.hpp
extern/taskflow/sycl/sycl_execution_policy.hpp
extern/taskflow/sycl/sycl_graph.hpp
extern/taskflow/sycl/sycl_meta.hpp
extern/taskflow/sycl/sycl_task.hpp
extern/taskflow/sycl/syclflow.hpp
extern/taskflow/sycl/algorithm/reduce.hpp
extern/taskflow/sycl/algorithm/sycl_for_each.hpp
extern/taskflow/sycl/algorithm/sycl_transform.hpp
extern/taskflow/utility/iterator.hpp
extern/taskflow/utility/latch.hpp
extern/taskflow/utility/macros.hpp
extern/taskflow/utility/math.hpp
extern/taskflow/utility/mpmc.hpp
extern/taskflow/utility/object_pool.hpp
extern/taskflow/utility/os.hpp
extern/taskflow/utility/serializer.hpp
extern/taskflow/utility/singleton.hpp
extern/taskflow/utility/small_vector.hpp
extern/taskflow/utility/stream.hpp
extern/taskflow/utility/traits.hpp
extern/taskflow/utility/uuid.hpp
include/oineus/cell.h
include/oineus/cell_with_value.h
include/oineus/common_defs.h
include/oineus/decomposition.h
include/oineus/diagram.h
include/oineus/filtration.h
include/oineus/inclusion_filtration.h
include/oineus/kernel.h
include/oineus/log_wrapper.h
include/oineus/loss.h
include/oineus/lower_star.h
include/oineus/mem_reclamation.h
include/oineus/min_filtration.h
include/oineus/oineus.h
include/oineus/params.h
include/oineus/product_cell.h
include/oineus/profile.h
include/oineus/simpl_map_filtration.h
include/oineus/simplex.h
include/oineus/sparse_matrix.h
include/oineus/timer.h
include/oineus/top_optimizer.h
include/oineus/vectorizer.h
include/oineus/vietoris_rips.h
include/oineus/io/read_write.h
oineus.egg-info/PKG-INFO
oineus.egg-info/SOURCES.txt
oineus.egg-info/dependency_links.txt
oineus.egg-info/not-zip-safe
oineus.egg-info/requires.txt
oineus.egg-info/top_level.txt
src/read_write.cpp
tests/CMakeLists.txt
tests/a_6.txt
tests/check.py
tests/dgm_vertebra_32_0.npy
tests/dgm_vertebra_32_1.npy
tests/dgm_vertebra_32_2.npy
tests/dgm_vertebra_32_neg_0.npy
tests/dgm_vertebra_32_neg_1.npy
tests/dgm_vertebra_32_neg_2.npy
tests/induced-matching-pytest.py
tests/kernel-pytest.py
tests/kernel-test-1.py
tests/test_oin.py
tests/test_oin_random.py
tests/test_oin_vertebra.py
tests/tests_kernel_cylinder.cpp
tests/tests_reduction.cpp
tests/tests_sparse_matrix.cpp
tests/vertebra_32x32x32_float32.npy