LICENSE
README.md
pyproject.toml
setup.py
nnunet_extend/__init__.py
nnunet_extend.egg-info/PKG-INFO
nnunet_extend.egg-info/SOURCES.txt
nnunet_extend.egg-info/dependency_links.txt
nnunet_extend.egg-info/entry_points.txt
nnunet_extend.egg-info/requires.txt
nnunet_extend.egg-info/top_level.txt
nnunet_extend/dataset_conversion/ADE20K.py
nnunet_extend/dataset_conversion/DRIVE.py
nnunet_extend/dataset_conversion/RoadSegmentation.py
nnunet_extend/dataset_conversion/__init__.py
nnunet_extend/evaluation/evaluate_predictions.py
nnunet_extend/inference/__init__.py
nnunet_extend/inference/custom_inference.py
nnunet_extend/inference/predict_from_raw_data.py
nnunet_extend/network_architecture/DFormer.py
nnunet_extend/network_architecture/LKMUNet.py
nnunet_extend/network_architecture/LightMUNet.py
nnunet_extend/network_architecture/SegMamba.py
nnunet_extend/network_architecture/__init__.py
nnunet_extend/network_architecture/mmseg.py
nnunet_extend/network_architecture/monai_model.py
nnunet_extend/network_architecture/torchvision_model_zoo.py
nnunet_extend/network_architecture/BiFormer/model.py
nnunet_extend/network_architecture/BiFormer/backbones/biformer.py
nnunet_extend/network_architecture/BiFormer/configs/upernet_biformer_base_512.py
nnunet_extend/network_architecture/BiFormer/configs/upernet_biformer_small_512.py
nnunet_extend/network_architecture/CCNet/model.py
nnunet_extend/network_architecture/CCNet/configs/ccnet_r101-d8.py
nnunet_extend/network_architecture/CCNet/configs/ccnet_r50-d8.py
nnunet_extend/network_architecture/CoTr/CNNBackbone.py
nnunet_extend/network_architecture/CoTr/ResTranUnet.py
nnunet_extend/network_architecture/CoTr/__init__.py
nnunet_extend/network_architecture/CoTr/neural_network.py
nnunet_extend/network_architecture/CoTr/DeTrans/DeformableTrans.py
nnunet_extend/network_architecture/CoTr/DeTrans/position_encoding.py
nnunet_extend/network_architecture/CoTr/DeTrans/ops/functions/ms_deform_attn_func.py
nnunet_extend/network_architecture/CoTr/DeTrans/ops/modules/__init__.py
nnunet_extend/network_architecture/CoTr/DeTrans/ops/modules/ms_deform_attn.py
nnunet_extend/network_architecture/DAMamba/model.py
nnunet_extend/network_architecture/DAMamba/backbones/DAMamba.py
nnunet_extend/network_architecture/DAMamba/backbones/utils.py
nnunet_extend/network_architecture/DAMamba/backbones/ops_dcnv3/setup.py
nnunet_extend/network_architecture/DAMamba/backbones/ops_dcnv3/test.py
nnunet_extend/network_architecture/DAMamba/backbones/ops_dcnv3/functions/__init__.py
nnunet_extend/network_architecture/DAMamba/backbones/ops_dcnv3/functions/dcnv3_func.py
nnunet_extend/network_architecture/DAMamba/backbones/ops_dcnv3/modules/__init__.py
nnunet_extend/network_architecture/DAMamba/backbones/ops_dcnv3/modules/dcnv3.py
nnunet_extend/network_architecture/DAMamba/backbones/selective_scan/setup.py
nnunet_extend/network_architecture/DAMamba/configs/upernet_DAMamba.py
nnunet_extend/network_architecture/DAMamba/configs/upernet_DAMamba_base.py
nnunet_extend/network_architecture/DAMamba/configs/upernet_DAMamba_small.py
nnunet_extend/network_architecture/DAMamba/configs/upernet_DAMamba_tiny.py
nnunet_extend/network_architecture/DSCNet/DSCNet_3DTiny.py
nnunet_extend/network_architecture/DSCNet/DSCNet_2D/S3_DSCNet.py
nnunet_extend/network_architecture/DSCNet/DSCNet_2D/S3_DSCNet_pro.py
nnunet_extend/network_architecture/DSCNet/DSCNet_2D/S3_DSConv.py
nnunet_extend/network_architecture/DSCNet/DSCNet_2D/S3_DSConv_pro.py
nnunet_extend/network_architecture/DSCNet/DSCNet_3D/S3_DSCNet.py
nnunet_extend/network_architecture/DSCNet/DSCNet_3D/S3_DSConv.py
nnunet_extend/network_architecture/DeBiFormer/model.py
nnunet_extend/network_architecture/DeBiFormer/backbones/debiformer.py
nnunet_extend/network_architecture/DeBiFormer/configs/fpn_512_debi_base.py
nnunet_extend/network_architecture/DeBiFormer/configs/fpn_512_debi_small.py
nnunet_extend/network_architecture/DeBiFormer/configs/upernet_512_debi_base.py
nnunet_extend/network_architecture/DeBiFormer/configs/upernet_512_debi_small.py
nnunet_extend/network_architecture/EMNet/em_net_model.py
nnunet_extend/network_architecture/MedNeXt/MedNextV1.py
nnunet_extend/network_architecture/MedNeXt/__init__.py
nnunet_extend/network_architecture/MedNeXt/blocks.py
nnunet_extend/network_architecture/MedNeXt/create_mednext_v1.py
nnunet_extend/network_architecture/Samba/model.py
nnunet_extend/network_architecture/Samba/backbones/samba.py
nnunet_extend/network_architecture/Samba/configs/upernet_samba.py
nnunet_extend/network_architecture/TransBTS/IntmdSequential.py
nnunet_extend/network_architecture/TransBTS/PositionalEncoding.py
nnunet_extend/network_architecture/TransBTS/TransBTS_downsample8x_skipconnection.py
nnunet_extend/network_architecture/TransBTS/Transformer.py
nnunet_extend/network_architecture/TransBTS/Unet_skipconnection.py
nnunet_extend/network_architecture/TransBTS/__init__.py
nnunet_extend/network_architecture/TransFuse/DeiT.py
nnunet_extend/network_architecture/TransFuse/TransFuse.py
nnunet_extend/network_architecture/TransFuse/__init__.py
nnunet_extend/network_architecture/TransFuse/vision_transformer.py
nnunet_extend/network_architecture/TransUNet/__init__.py
nnunet_extend/network_architecture/TransUNet/transunet.py
nnunet_extend/network_architecture/TransUNet/vit_seg_configs.py
nnunet_extend/network_architecture/TransUNet/vit_seg_modeling.py
nnunet_extend/network_architecture/TransUNet/vit_seg_modeling_resnet_skip.py
nnunet_extend/network_architecture/UMamba/UMambaBot_2d.py
nnunet_extend/network_architecture/UMamba/UMambaBot_3d.py
nnunet_extend/network_architecture/UMamba/UMambaEnc_2d.py
nnunet_extend/network_architecture/UMamba/UMambaEnc_3d.py
nnunet_extend/network_architecture/UNeXt/unext2d.py
nnunet_extend/network_architecture/UNeXt/unext3d.py
nnunet_extend/network_architecture/UTNet/__init__.py
nnunet_extend/network_architecture/UTNet/conv_trans_utils.py
nnunet_extend/network_architecture/UTNet/unet_utils.py
nnunet_extend/network_architecture/UTNet/utnet.py
nnunet_extend/network_architecture/UXNet3D/__init__.py
nnunet_extend/network_architecture/UXNet3D/network_backbone.py
nnunet_extend/network_architecture/UXNet3D/uxnet_encoder.py
nnunet_extend/network_architecture/nnFormer/__init__.py
nnunet_extend/network_architecture/nnFormer/nnFormer_tumor.py
nnunet_extend/postprocessing/__init__.py
nnunet_extend/postprocessing/custom_postprocess.py
nnunet_extend/registry/__init__.py
nnunet_extend/registry/registry.py
nnunet_extend/run/__init__.py
nnunet_extend/run/run_training.py
nnunet_extend/training/__init__.py
nnunet_extend/training/data_augmentation/skeletonization.py
nnunet_extend/training/dataloading/data_loader_skel.py
nnunet_extend/training/loss/BoundaryDoULoss.py
nnunet_extend/training/loss/DeepSupervisionLoss.py
nnunet_extend/training/loss/DropCELoss.py
nnunet_extend/training/loss/SkeletonRecallLoss.py
nnunet_extend/training/loss/__init__.py
nnunet_extend/training/loss/base.py
nnunet_extend/training/loss/cbDiceLoss.py
nnunet_extend/training/loss/clDiceLoss.py
nnunet_extend/training/loss/compound_losses.py
nnunet_extend/training/loss/skeletonize.py
nnunet_extend/training/loss/soft_skeleton.py
nnunet_extend/training/loss/SuperVoxelLoss/__init__.py
nnunet_extend/training/loss/SuperVoxelLoss/affinity_loss.py
nnunet_extend/training/loss/SuperVoxelLoss/critical_detection_2d.py
nnunet_extend/training/loss/SuperVoxelLoss/critical_detection_3d.py
nnunet_extend/training/loss/SuperVoxelLoss/loss.py
nnunet_extend/training/trainers/BiFormerTrainer.py
nnunet_extend/training/trainers/CCNetTrainer.py
nnunet_extend/training/trainers/CoTrTrainer.py
nnunet_extend/training/trainers/CompoundLossTrainer.py
nnunet_extend/training/trainers/DAMambaTrainer.py
nnunet_extend/training/trainers/DCSNetTrainer.py
nnunet_extend/training/trainers/DFormerTrainer.py
nnunet_extend/training/trainers/DeBiFormerTrainer.py
nnunet_extend/training/trainers/LKMUNetTrainer.py
nnunet_extend/training/trainers/LightMUNetTrainer.py
nnunet_extend/training/trainers/MedNeXtTrainer.py
nnunet_extend/training/trainers/SegMamba.py
nnunet_extend/training/trainers/SwinUNETRTrainer.py
nnunet_extend/training/trainers/TransUNetTrainer.py
nnunet_extend/training/trainers/UMambaTrainer.py
nnunet_extend/training/trainers/UNETRTrainer.py
nnunet_extend/training/trainers/UXNetTrainer.py
nnunet_extend/training/trainers/__init__.py
nnunet_extend/training/trainers/base.py
nnunet_extend/training/trainers/loss/BoundaryDoUTrainer.py
nnunet_extend/training/trainers/loss/DropCETrainer.py
nnunet_extend/training/trainers/loss/SkeletonRecallTrainer.py
nnunet_extend/training/trainers/loss/SuperVoxelTrainer.py
nnunet_extend/training/trainers/loss/__init__.py
nnunet_extend/training/trainers/loss/base.py
nnunet_extend/training/trainers/loss/cbDiceTrainer.py
nnunet_extend/training/trainers/loss/clDiceTrainer.py
nnunet_extend/utils/utils.py