.editorconfig
.gitattributes
.gitignore
Pipfile
Pipfile.lock
README.md
config.ini.example
pyproject.toml
setup.cfg
setup.py
tox.ini
.circleci/config.yml
nlisim/__init__.py
nlisim/cell.py
nlisim/cli.py
nlisim/config.py
nlisim/coordinates.py
nlisim/diffusion.py
nlisim/grid.py
nlisim/module.py
nlisim/molecule.py
nlisim/postprocess.py
nlisim/random.py
nlisim/solver.py
nlisim/state.py
nlisim/validation.py
nlisim.egg-info/PKG-INFO
nlisim.egg-info/SOURCES.txt
nlisim.egg-info/dependency_links.txt
nlisim.egg-info/entry_points.txt
nlisim.egg-info/requires.txt
nlisim.egg-info/top_level.txt
nlisim/modules/__init__.py
nlisim/modules/afumigatus.py
nlisim/modules/epithelium.py
nlisim/modules/fungus.py
nlisim/modules/geometry.py
nlisim/modules/macrophage.py
nlisim/modules/molecules.py
nlisim/modules/neutrophil.py
nlisim/modules/phagocyte.py
nlisim/modules/plot.py
nlisim/modules/state_output.py
nlisim/modules/visualization.py
notebooks/sample.py.ipynb
test/conftest.py
test/test_afumigatus.py
test/test_cell.py
test/test_config.py
test/test_diffusion.py
test/test_epithelium.py
test/test_fungus.py
test/test_grid.py
test/test_macrophage.py
test/test_molecules.py
test/test_neutrophil.py
test/test_state.py
test/test_validator.py