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# interfaces.slicer.quantification.changequantification

## IntensityDifferenceMetric

Link to code

Wraps command **/home/raid3/gorgolewski/software/slicer/Slicer –launch IntensityDifferenceMetric **

title:
  Intensity Difference Change Detection (FAST)
category:
  Quantification.ChangeQuantification
description:
  Quantifies the changes between two spatially aligned images based on the pixel-wise difference of image intensities.

version: 0.1

contributor: Andrey Fedorov

acknowledgements:

Inputs:

    [Mandatory]

    [Optional]
    args: (a string)
            Additional parameters to the command
    baselineSegmentationVolume: (an existing file name)
            Label volume that contains segmentation of the structure of interest in the baseline
            volume.
    baselineVolume: (an existing file name)
            Baseline volume to be compared to
    changingBandSize: (an integer)
            How far (in mm) from the boundary of the segmentation should the intensity changes be
            considered.
    environ: (a dictionary with keys which are a value of type 'str' and with values which
             are a value of type 'str', nipype default value: {})
            Environment variables
    followupVolume: (an existing file name)
            Followup volume to be compare to the baseline
    ignore_exception: (a boolean, nipype default value: False)
            Print an error message instead of throwing an exception in case the interface fails to
            run
    outputVolume: (a boolean or a file name)
            Output volume to keep the results of change quantification.
    reportFileName: (a boolean or a file name)
            Report file name
    sensitivityThreshold: (a float)
            This parameter should be between 0 and 1, and defines how sensitive the metric should be
            to the intensity changes.

Outputs:

    outputVolume: (an existing file name)
            Output volume to keep the results of change quantification.
    reportFileName: (an existing file name)
            Report file name