README.md
setup.py
examples/__init__.py
examples/a_generate_phantoms_for_examples.py
examples/caliber_usage_distances_example.py
examples/caliber_usage_example.py
examples/manipulator_example.py
examples/prototype_check_imperfections.py
examples/prototype_clean_a_segmentation.py
examples/prototype_open_segmentations_in_freeview.py
examples/prototype_segment_an_image.py
examples/prototype_symmetrise_a_segmentation.py
examples/simple_label_fusion.py
examples/simple_relabelling_example.py
nilabels/__init__.py
nilabels/definitions.py
nilabels.egg-info/PKG-INFO
nilabels.egg-info/SOURCES.txt
nilabels.egg-info/dependency_links.txt
nilabels.egg-info/requires.txt
nilabels.egg-info/top_level.txt
nilabels/agents/__init__.py
nilabels/agents/agents_controller.py
nilabels/agents/checker.py
nilabels/agents/fuser.py
nilabels/agents/header_controller.py
nilabels/agents/intensities_manipulator.py
nilabels/agents/labels_manipulator.py
nilabels/agents/math.py
nilabels/agents/measurer.py
nilabels/agents/segmenter.py
nilabels/agents/shape_manipulator.py
nilabels/agents/symmetrizer.py
nilabels/tools/__init__.py
nilabels/tools/aux_methods/__init__.py
nilabels/tools/aux_methods/label_descriptor_manager.py
nilabels/tools/aux_methods/morpological_operations.py
nilabels/tools/aux_methods/sanity_checks.py
nilabels/tools/aux_methods/utils.py
nilabels/tools/aux_methods/utils_nib.py
nilabels/tools/aux_methods/utils_path.py
nilabels/tools/aux_methods/utils_rotations.py
nilabels/tools/caliber/__init__.py
nilabels/tools/caliber/distances.py
nilabels/tools/caliber/volumes_and_values.py
nilabels/tools/cleaning/__init__.py
nilabels/tools/cleaning/labels_cleaner.py
nilabels/tools/detections/__init__.py
nilabels/tools/detections/check_imperfections.py
nilabels/tools/detections/contours.py
nilabels/tools/detections/get_segmentation.py
nilabels/tools/detections/island_detection.py
nilabels/tools/image_colors_manipulations/__init__.py
nilabels/tools/image_colors_manipulations/cutter.py
nilabels/tools/image_colors_manipulations/normaliser.py
nilabels/tools/image_colors_manipulations/relabeller.py
nilabels/tools/image_colors_manipulations/segmentation_to_rgb.py
nilabels/tools/image_shape_manipulations/__init__.py
nilabels/tools/image_shape_manipulations/apply_passepartout.py
nilabels/tools/image_shape_manipulations/merger.py
nilabels/tools/image_shape_manipulations/splitter.py
nilabels/tools/visualiser/__init__.py
nilabels/tools/visualiser/graphs_and_stats.py
nilabels/tools/visualiser/see_volume.py
nilabels/tools/visualiser/volume_manipulations_for_visualisation.py
tests/__init__.py
tests/z_decorators.py
tests/agents/__init__.py
tests/agents/test_main_app_agent.py
tests/tools/__init__.py
tests/tools/decorators_tools.py
tests/tools/test_aux_methods_labels_descriptor_manager.py
tests/tools/test_aux_methods_morphological_operations.py
tests/tools/test_aux_methods_permutations.py
tests/tools/test_aux_methods_sanity_checks.py
tests/tools/test_aux_methods_utils.py
tests/tools/test_aux_methods_utils_nib.py
tests/tools/test_aux_methods_utils_path.py
tests/tools/test_aux_methods_utils_rotations.py
tests/tools/test_caliber_distances.py
tests/tools/test_caliber_volumes_and_values.py
tests/tools/test_cleaning_labels_cleaner.py
tests/tools/test_detections_check_imperfections.py
tests/tools/test_detections_contours.py
tests/tools/test_detections_get_segmentation.py
tests/tools/test_detections_island_detection.py
tests/tools/test_image_colors_manip_cutter.py
tests/tools/test_image_colors_manip_normaliser.py
tests/tools/test_image_colors_manip_relabeller.py
tests/tools/test_image_colors_manip_segm_to_rgb.py
tests/tools/test_image_shape_manip_apply_passepartout.py
tests/tools/test_image_shape_manip_merger.py
tests/tools/test_image_shape_manip_splitter.py
tests/tools/test_labels_checker.py