Metadata-Version: 2.1
Name: nheatmap
Version: 0.1.4
Summary: A painless and customizable tool to generate heatmap with hiearchical clustering results and additional data bars.
Home-page: https://github.com/xuesoso/nheatmap
Author: YSX
Author-email: xuesoso@gmail.com
License: LICENSE
Description: ![Logo](logo.png)
        
        # nheatmap
        Inspired by pheatmap in R, this plotting tool aims to enable multi-level heatmap with the option to perform hierarchical clustering. The goal is to develop a python plotting package that is both intuitive in usage and extensive in plotting configuration.
        
        ![Example](./examples/example1.png)
        
        ## Requirements
        - `python >= 3.5`
        - `matplotlib >= 3.0.3`
        - `scipy >= 1.3.1`
        - `numpy >= 1.17.2`
        - `pandas >= 0.25.1`
        
        ## Installation
        - Option 1 via pip:
        ```bash
        pip install nheatmap
        ```
        
        - Option 2 via github:
        ```bash
        git clone https://github.com/xuesoso/nheatmap
        ```
        Include the cloned directory as part of the python path
        
        ## Usage
        - [Check here](https://github.com/xuesoso/nheatmap/blob/master/tutorial.ipynb) for a tutorial on usage.
        
        ## To-do
        - [X] Documentation of the code
        - [ ] Cutting of heatmap
        - [ ] Bottom panel plots
        - [ ] Enable usage of AnnData structure
        - [ ] Highlight individual rows / columns
        
        ## Other plotting tools
        - [DensityPlot](https://github.com/xuesoso/DensityPlot)
        
Keywords: heatmap,hiearchical clustering,neat heatmap
Platform: UNKNOWN
Description-Content-Type: text/markdown
