MANIFEST.in
README
VERSION
install.sh
setup.py
bin/wBamToWig.py
bin/wBedToWig.py
bin/wSam2Bed.py
bin/wWigPlot.py
bin/wXLSToTXT.py
external/KentLib/README
external/KentLib/makefile
external/KentLib/inc/ace.h
external/KentLib/inc/aliType.h
external/KentLib/inc/apacheLog.h
external/KentLib/inc/asParse.h
external/KentLib/inc/axt.h
external/KentLib/inc/bPlusTree.h
external/KentLib/inc/bamFile.h
external/KentLib/inc/bandExt.h
external/KentLib/inc/base64.h
external/KentLib/inc/basicBed.h
external/KentLib/inc/bbiFile.h
external/KentLib/inc/bigBed.h
external/KentLib/inc/bigWig.h
external/KentLib/inc/binRange.h
external/KentLib/inc/bits.h
external/KentLib/inc/blastParse.h
external/KentLib/inc/boxClump.h
external/KentLib/inc/boxLump.h
external/KentLib/inc/bwgInternal.h
external/KentLib/inc/cda.h
external/KentLib/inc/cgi_build_rules.mk
external/KentLib/inc/chain.h
external/KentLib/inc/chainBlock.h
external/KentLib/inc/chainConnect.h
external/KentLib/inc/chainToAxt.h
external/KentLib/inc/chainToPsl.h
external/KentLib/inc/cheapcgi.h
external/KentLib/inc/cirTree.h
external/KentLib/inc/codebias.h
external/KentLib/inc/colHash.h
external/KentLib/inc/common.h
external/KentLib/inc/common.mk
external/KentLib/inc/correlate.h
external/KentLib/inc/crTree.h
external/KentLib/inc/crudeali.h
external/KentLib/inc/diGraph.h
external/KentLib/inc/diGraph.h.97
external/KentLib/inc/dlist.h
external/KentLib/inc/dnaLoad.h
external/KentLib/inc/dnaMarkov.h
external/KentLib/inc/dnaMotif.h
external/KentLib/inc/dnaseq.h
external/KentLib/inc/dnautil.h
external/KentLib/inc/dtdParse.h
external/KentLib/inc/dystring.h
external/KentLib/inc/emblParse.h
external/KentLib/inc/ens.h
external/KentLib/inc/errCatch.h
external/KentLib/inc/errabort.h
external/KentLib/inc/fa.h
external/KentLib/inc/filePath.h
external/KentLib/inc/flydna.h
external/KentLib/inc/fof.h
external/KentLib/inc/fuzzyFind.h
external/KentLib/inc/gapCalc.h
external/KentLib/inc/gdf.h
external/KentLib/inc/genoFind.h
external/KentLib/inc/genomeRangeTree.h
external/KentLib/inc/gfClientLib.h
external/KentLib/inc/gfPcrLib.h
external/KentLib/inc/gfWebLib.h
external/KentLib/inc/gff.h
external/KentLib/inc/gff3.h
external/KentLib/inc/gfxPoly.h
external/KentLib/inc/gifLabel.h
external/KentLib/inc/gifcodes.h
external/KentLib/inc/hacTree.h
external/KentLib/inc/hash.h
external/KentLib/inc/hgGene.h
external/KentLib/inc/hgap.h
external/KentLib/inc/hgdb.h
external/KentLib/inc/histogram.h
external/KentLib/inc/hmmPfamParse.h
external/KentLib/inc/hmmstats.h
external/KentLib/inc/htmlPage.h
external/KentLib/inc/htmshell.h
external/KentLib/inc/https.h
external/KentLib/inc/intValTree.h
external/KentLib/inc/internet.h
external/KentLib/inc/itsa.h
external/KentLib/inc/jointalign.h
external/KentLib/inc/jpegSize.h
external/KentLib/inc/keys.h
external/KentLib/inc/knetUdc.h
external/KentLib/inc/kxTok.h
external/KentLib/inc/linefile.h
external/KentLib/inc/localmem.h
external/KentLib/inc/log.h
external/KentLib/inc/maDbRep.h
external/KentLib/inc/maToFf.h
external/KentLib/inc/maf.h
external/KentLib/inc/md5.h
external/KentLib/inc/memalloc.h
external/KentLib/inc/memgfx.h
external/KentLib/inc/metaWig.h
external/KentLib/inc/mime.h
external/KentLib/inc/net.h
external/KentLib/inc/nib.h
external/KentLib/inc/nibTwo.h
external/KentLib/inc/nt4.h
external/KentLib/inc/obscure.h
external/KentLib/inc/oldGff.h
external/KentLib/inc/oligoTm.h
external/KentLib/inc/ooc.h
external/KentLib/inc/options.h
external/KentLib/inc/pairHmm.h
external/KentLib/inc/patSpace.h
external/KentLib/inc/peakCluster.h
external/KentLib/inc/phyloTree.h
external/KentLib/inc/pipeline.h
external/KentLib/inc/portable.h
external/KentLib/inc/portimpl.h
external/KentLib/inc/psGfx.h
external/KentLib/inc/psPoly.h
external/KentLib/inc/pscmGfx.h
external/KentLib/inc/psl.h
external/KentLib/inc/pslTbl.h
external/KentLib/inc/pslTransMap.h
external/KentLib/inc/pthreadWrap.h
external/KentLib/inc/qa.h
external/KentLib/inc/quickHeap.h
external/KentLib/inc/quotedP.h
external/KentLib/inc/ra.h
external/KentLib/inc/rainbow.h
external/KentLib/inc/rangeTree.h
external/KentLib/inc/rbTree.h
external/KentLib/inc/regexHelper.h
external/KentLib/inc/repMask.h
external/KentLib/inc/rle.h
external/KentLib/inc/rnautil.h
external/KentLib/inc/rql.h
external/KentLib/inc/rudp.h
external/KentLib/inc/scoreWindow.h
external/KentLib/inc/seg.h
external/KentLib/inc/seqOut.h
external/KentLib/inc/seqStats.h
external/KentLib/inc/shaRes.h
external/KentLib/inc/sig.h
external/KentLib/inc/slog.h
external/KentLib/inc/snof.h
external/KentLib/inc/snofmake.h
external/KentLib/inc/spaceSaver.h
external/KentLib/inc/spacedColumn.h
external/KentLib/inc/spacedSeed.h
external/KentLib/inc/splatAli.h
external/KentLib/inc/splix.h
external/KentLib/inc/sqlList.h
external/KentLib/inc/sqlNum.h
external/KentLib/inc/subText.h
external/KentLib/inc/sufa.h
external/KentLib/inc/sufx.h
external/KentLib/inc/supStitch.h
external/KentLib/inc/synQueue.h
external/KentLib/inc/tabRow.h
external/KentLib/inc/textOut.h
external/KentLib/inc/tokenizer.h
external/KentLib/inc/trans3.h
external/KentLib/inc/trix.h
external/KentLib/inc/twoBit.h
external/KentLib/inc/udc.h
external/KentLib/inc/unfin.h
external/KentLib/inc/vGfx.h
external/KentLib/inc/vGfxPrivate.h
external/KentLib/inc/vcf.h
external/KentLib/inc/verbose.h
external/KentLib/inc/wormdna.h
external/KentLib/inc/xAli.h
external/KentLib/inc/xa.h
external/KentLib/inc/xap.h
external/KentLib/inc/xenalign.h
external/KentLib/inc/xmlEscape.h
external/KentLib/inc/xp.h
external/KentLib/inc/zlibFace.h
external/KentLib/lib/aliType.c
external/KentLib/lib/apacheLog.c
external/KentLib/lib/asParse.c
external/KentLib/lib/axt.c
external/KentLib/lib/axtAffine.c
external/KentLib/lib/bPlusTree.c
external/KentLib/lib/bamFile.c
external/KentLib/lib/base64.c
external/KentLib/lib/basicBed.c
external/KentLib/lib/bbiRead.c
external/KentLib/lib/bbiWrite.c
external/KentLib/lib/bigBed.c
external/KentLib/lib/binRange.c
external/KentLib/lib/bits.c
external/KentLib/lib/blastOut.c
external/KentLib/lib/blastParse.c
external/KentLib/lib/boxClump.c
external/KentLib/lib/boxLump.c
external/KentLib/lib/bwgCreate.c
external/KentLib/lib/bwgQuery.c
external/KentLib/lib/bwgValsOnChrom.c
external/KentLib/lib/cda.c
external/KentLib/lib/chain.c
external/KentLib/lib/chainBlock.c
external/KentLib/lib/chainConnect.c
external/KentLib/lib/chainToAxt.c
external/KentLib/lib/chainToPsl.c
external/KentLib/lib/cheapcgi.c
external/KentLib/lib/cirTree.c
external/KentLib/lib/codebias.c
external/KentLib/lib/colHash.c
external/KentLib/lib/common.c
external/KentLib/lib/common.ps
external/KentLib/lib/common.pss
external/KentLib/lib/correlate.c
external/KentLib/lib/crTree.c
external/KentLib/lib/dgRange.c
external/KentLib/lib/diGraph.c
external/KentLib/lib/dlist.c
external/KentLib/lib/dnaLoad.c
external/KentLib/lib/dnaMarkov.c
external/KentLib/lib/dnaMotif.c
external/KentLib/lib/dnaMotif.pss
external/KentLib/lib/dnaseq.c
external/KentLib/lib/dnautil.c
external/KentLib/lib/dtdParse.c
external/KentLib/lib/dystring.c
external/KentLib/lib/emblParse.c
external/KentLib/lib/errCatch.c
external/KentLib/lib/errabort.c
external/KentLib/lib/fa.c
external/KentLib/lib/ffAli.c
external/KentLib/lib/ffScore.c
external/KentLib/lib/filePath.c
external/KentLib/lib/fixColor.c
external/KentLib/lib/flydna.c
external/KentLib/lib/fof.c
external/KentLib/lib/fuzzyShow.c
external/KentLib/lib/gapCalc.c
external/KentLib/lib/gdf.c
external/KentLib/lib/gemfont.c
external/KentLib/lib/gemfont.h
external/KentLib/lib/genomeRangeTree.c
external/KentLib/lib/gfNet.c
external/KentLib/lib/gff.c
external/KentLib/lib/gff3.c
external/KentLib/lib/gfxPoly.c
external/KentLib/lib/gifLabel.c
external/KentLib/lib/hacTree.c
external/KentLib/lib/hash.c
external/KentLib/lib/histogram.c
external/KentLib/lib/hmmPfamParse.c
external/KentLib/lib/hmmstats.c
external/KentLib/lib/htmlPage.c
external/KentLib/lib/htmshell.c
external/KentLib/lib/https.c
external/KentLib/lib/intExp.c
external/KentLib/lib/intValTree.c
external/KentLib/lib/internet.c
external/KentLib/lib/itsa.c
external/KentLib/lib/jointalign.c
external/KentLib/lib/jpegSize.c
external/KentLib/lib/keys.c
external/KentLib/lib/knetUdc.c.bak
external/KentLib/lib/kxTok.c
external/KentLib/lib/linefile.c
external/KentLib/lib/localmem.c
external/KentLib/lib/log.c
external/KentLib/lib/maf.c
external/KentLib/lib/mafFromAxt.c
external/KentLib/lib/mafScore.c
external/KentLib/lib/makefile
external/KentLib/lib/md5.c
external/KentLib/lib/memalloc.c
external/KentLib/lib/memgfx.c
external/KentLib/lib/metaWig.c
external/KentLib/lib/mgCircle.c
external/KentLib/lib/mgCourier10.c
external/KentLib/lib/mgCourier12.c
external/KentLib/lib/mgCourier14.c
external/KentLib/lib/mgCourier18.c
external/KentLib/lib/mgCourier24.c
external/KentLib/lib/mgCourier34.c
external/KentLib/lib/mgCourier8.c
external/KentLib/lib/mgHelvetica10.c
external/KentLib/lib/mgHelvetica12.c
external/KentLib/lib/mgHelvetica14.c
external/KentLib/lib/mgHelvetica18.c
external/KentLib/lib/mgHelvetica24.c
external/KentLib/lib/mgHelvetica34.c
external/KentLib/lib/mgHelvetica8.c
external/KentLib/lib/mgHelveticaBold10.c
external/KentLib/lib/mgHelveticaBold12.c
external/KentLib/lib/mgHelveticaBold14.c
external/KentLib/lib/mgHelveticaBold18.c
external/KentLib/lib/mgHelveticaBold24.c
external/KentLib/lib/mgHelveticaBold34.c
external/KentLib/lib/mgHelveticaBold8.c
external/KentLib/lib/mgPolygon.c
external/KentLib/lib/mgSail8.c
external/KentLib/lib/mgSixhi6.c
external/KentLib/lib/mgTimes10.c
external/KentLib/lib/mgTimes12.c
external/KentLib/lib/mgTimes14.c
external/KentLib/lib/mgTimes18.c
external/KentLib/lib/mgTimes24.c
external/KentLib/lib/mgTimes34.c
external/KentLib/lib/mgTimes8.c
external/KentLib/lib/mime.c
external/KentLib/lib/net.c
external/KentLib/lib/nib.c
external/KentLib/lib/nibTwo.c
external/KentLib/lib/nt4.c
external/KentLib/lib/numObscure.c
external/KentLib/lib/obscure.c
external/KentLib/lib/oldGff.c
external/KentLib/lib/oligoTm.c
external/KentLib/lib/options.c
external/KentLib/lib/osunix.c
external/KentLib/lib/pairHmm.c
external/KentLib/lib/peakCluster.c
external/KentLib/lib/phyloTree.c
external/KentLib/lib/pipeline.c
external/KentLib/lib/pngwrite.c
external/KentLib/lib/portimpl.c
external/KentLib/lib/psGfx.c
external/KentLib/lib/psPoly.c
external/KentLib/lib/pscmGfx.c
external/KentLib/lib/psl.c
external/KentLib/lib/pslGenoShow.c
external/KentLib/lib/pslShow.c
external/KentLib/lib/pslTbl.c
external/KentLib/lib/pslTransMap.c
external/KentLib/lib/pthreadWrap.c
external/KentLib/lib/qa.c
external/KentLib/lib/quickHeap.c
external/KentLib/lib/quotedP.c
external/KentLib/lib/ra.c
external/KentLib/lib/rainbow.c
external/KentLib/lib/rangeTree.c
external/KentLib/lib/rbTree.c
external/KentLib/lib/regexHelper.c
external/KentLib/lib/repMask.c
external/KentLib/lib/rle.c
external/KentLib/lib/rnautil.c
external/KentLib/lib/rqlEval.c
external/KentLib/lib/rqlParse.c
external/KentLib/lib/rudp.c
external/KentLib/lib/scoreWindow.c
external/KentLib/lib/seg.c
external/KentLib/lib/seqOut.c
external/KentLib/lib/seqStats.c
external/KentLib/lib/servBrcMcw.c
external/KentLib/lib/servCrunx.c
external/KentLib/lib/servcis.c
external/KentLib/lib/servcl.c
external/KentLib/lib/servmsII.c
external/KentLib/lib/servpws.c
external/KentLib/lib/shaRes.c
external/KentLib/lib/slog.c
external/KentLib/lib/snof.c
external/KentLib/lib/snofmake.c
external/KentLib/lib/snofsig.c
external/KentLib/lib/spaceSaver.c
external/KentLib/lib/spacedColumn.c
external/KentLib/lib/spacedSeed.c
external/KentLib/lib/splatAli.c
external/KentLib/lib/sqlList.c
external/KentLib/lib/sqlNum.c
external/KentLib/lib/subText.c
external/KentLib/lib/sufa.c
external/KentLib/lib/sufx.c
external/KentLib/lib/synQueue.c
external/KentLib/lib/tabRow.c
external/KentLib/lib/textOut.c
external/KentLib/lib/tokenizer.c
external/KentLib/lib/trix.c
external/KentLib/lib/twoBit.c
external/KentLib/lib/udc.c
external/KentLib/lib/vGfx.c
external/KentLib/lib/vPng.c
external/KentLib/lib/vcf.c
external/KentLib/lib/verbose.c
external/KentLib/lib/wildcmp.c
external/KentLib/lib/wormdna.c
external/KentLib/lib/xAli.c
external/KentLib/lib/xa.c
external/KentLib/lib/xap.c
external/KentLib/lib/xenshow.c
external/KentLib/lib/xmlEscape.c
external/KentLib/lib/xp.c
external/KentLib/lib/zlibFace.c
external/KentLib/lib/font/README
external/KentLib/lib/font/mgCourier10.c
external/KentLib/lib/font/mgCourier12.c
external/KentLib/lib/font/mgCourier14.c
external/KentLib/lib/font/mgCourier18.c
external/KentLib/lib/font/mgCourier24.c
external/KentLib/lib/font/mgCourier34.c
external/KentLib/lib/font/mgCourier8.c
external/KentLib/lib/font/mgHelvetica10.c
external/KentLib/lib/font/mgHelvetica12.c
external/KentLib/lib/font/mgHelvetica14.c
external/KentLib/lib/font/mgHelvetica18.c
external/KentLib/lib/font/mgHelvetica24.c
external/KentLib/lib/font/mgHelvetica34.c
external/KentLib/lib/font/mgHelvetica8.c
external/KentLib/lib/font/mgHelveticaBold10.c
external/KentLib/lib/font/mgHelveticaBold12.c
external/KentLib/lib/font/mgHelveticaBold14.c
external/KentLib/lib/font/mgHelveticaBold18.c
external/KentLib/lib/font/mgHelveticaBold24.c
external/KentLib/lib/font/mgHelveticaBold34.c
external/KentLib/lib/font/mgHelveticaBold8.c
external/KentLib/lib/font/mgSail8.c
external/KentLib/lib/font/mgSixhi6.c
external/KentLib/lib/font/mgTimes10.c
external/KentLib/lib/font/mgTimes12.c
external/KentLib/lib/font/mgTimes14.c
external/KentLib/lib/font/mgTimes18.c
external/KentLib/lib/font/mgTimes24.c
external/KentLib/lib/font/mgTimes34.c
external/KentLib/lib/font/mgTimes8.c
external/KentLib/wTwoBitIO/makefile
external/KentLib/wTwoBitIO/wTwoBitIO.c
external/KentLib/wWigIO/BigWigFile.py
external/KentLib/wWigIO/makefile
external/KentLib/wWigIO/wWigIO.c
external/KentLib/wWigIO/test/example.py
external/KentLib/wWigIO/test/test.bw
ngslib.egg-info/PKG-INFO
ngslib.egg-info/SOURCES.txt
ngslib.egg-info/dependency_links.txt
ngslib.egg-info/requires.txt
ngslib.egg-info/top_level.txt
scripts/wBedAnnotation.py
scripts/wBedExtend.py
scripts/wBedGetWig.py
scripts/wBedToFasta.py
scripts/wFindNearestAnnotation.py
scripts/wFindNearestTwoAnnotation.py
scripts/wFormatFasta.py
scripts/wGCContent.py
scripts/wGTFToTab.py
scripts/wGetExon.py
scripts/wGetIntron.py
scripts/wGetSeqByCoordinates.py
scripts/wGetSeqByName.py
scripts/wGetTSS.py
scripts/wMergeSort.py
scripts/wRandomBed.py
scripts/wTabToBed.py
scripts/wlncRNA.py
src/__init__.py
src/fdr.py
src/lprob.py
src/wRNAStruct.py
src/wStats.py
src/wplot.py