LICENSE
MANIFEST.in
README.md
config.ini
pyproject.toml
requirements.txt
setup.cfg
setup.py
NGPIris/__init__.py
NGPIris.egg-info/PKG-INFO
NGPIris.egg-info/SOURCES.txt
NGPIris.egg-info/dependency_links.txt
NGPIris.egg-info/entry_points.txt
NGPIris.egg-info/not-zip-safe
NGPIris.egg-info/requires.txt
NGPIris.egg-info/top_level.txt
NGPIris/cli/__init__.py
NGPIris/cli/base.py
NGPIris/cli/functions.py
NGPIris/cli/utils.py
NGPIris/hci/__init__.py
NGPIris/hci/hci.py
NGPIris/hci/template_query.json
NGPIris/hcp/__init__.py
NGPIris/hcp/config.py
NGPIris/hcp/errors.py
NGPIris/hcp/hcp.py
NGPIris/hcp/helpers.py
NGPIris/hcp/interactive.py
NGPIris/preproc/__init__.py
NGPIris/preproc/preproc.py
reference/covidMetadataAllowedValues.csv
reference/covidMetadataTemplate.csv
tests/__init__.py
tests/test_cmds.py
tests/test_hcp.py
tests/data/test.json
tests/data/test_reads_R1.fasterq
tests/data/test_reads_R1.fastq.gz