Metadata-Version: 2.1
Name: neuron-morphology
Version: 1.2.2
Summary: Tools for working with single-neuron morphological reconstructions
Author: Allen Institute for Brain Science
Author-email: Marmot@AllenInstitute.onmicrosoft.com
Keywords: neuroscience,bioinformatics,scientific
Classifier: Development Status :: 4 - Beta
Classifier: Intended Audience :: Science/Research
Classifier: License :: Other/Proprietary License
Classifier: Natural Language :: English
Classifier: Operating System :: OS Independent
Classifier: Programming Language :: Python :: 3.8
Classifier: Topic :: Scientific/Engineering :: Bio-Informatics
Description-Content-Type: text/markdown
License-File: LICENSE
Requires-Dist: matplotlib
Requires-Dist: pillow
Requires-Dist: pandas
Requires-Dist: numpy>=1.14.2
Requires-Dist: scipy>=1.0.0
Requires-Dist: six
Requires-Dist: allensdk
Requires-Dist: argschema
Requires-Dist: glymur<1.0.0
Requires-Dist: shapely<2.0.0
Requires-Dist: imageio<3.0.0
Requires-Dist: pg8000<2.0.0
Requires-Dist: boto3>=1.12.42
Requires-Dist: cloud-files
Requires-Dist: scikit-image>0.17
Requires-Dist: tables>=3.8
Provides-Extra: streamlines
Requires-Dist: fenics-dolfinx; extra == "streamlines"
Requires-Dist: python-gmsh; extra == "streamlines"
Requires-Dist: rasterio; extra == "streamlines"

[![Documentation Status](https://readthedocs.org/projects/neuron-morphology/badge/?version=latest)](https://neuron-morphology.readthedocs.io/en/latest/?badge=latest)
![build workflow](https://github.com/alleninstitute/neuron_morphology/actions/workflows/python-package-conda.yml/badge.svg)

neuron_morphology
=================

A package for working with single-neuron morphological reconstruction data, such as those in the [Allen Cell Types Database](https://celltypes.brain-map.org/). Provides tools for processing, visualizing, and analyzing such reconstructions.

For usage and installation instructions, see the [documentation](https://neuron-morphology.readthedocs.io/en/latest/).

Contributing
------------
We welcome contributions! Please see our [contribution guide](CONTRIBUTING.md) for more information. Thank you!

Level of Support
----------------
We are planning on occasional updating this tool with no fixed schedule. Community involvement is encouraged through both issues and pull requests.

