jsonschema>=3.2.0
PyYAML>=5.4
scipy>=1.4.1
h5py>=3.9.0
hdmf>=3.13.0
hdmf_zarr>=0.7.0
pynwb>=2.7.0
pydantic>=2.0.0
typing_extensions>=4.1.0
psutil>=5.8.0
tqdm>=4.60.0
pandas
parse>=1.20.0
click
docstring-parser
packaging

[:python_version <= "3.11"]
numpy<2.0.0,>=1.22.0

[:python_version >= "3.12"]
numpy<2.0.0,>=1.26.0

[abf]
neo>=0.13.2
ndx-dandi-icephys>=0.4.0

[alphaomega]
spikeinterface>=0.101.0
neo>=0.13.2
natsort>=7.1.1
MEArec>=1.8.0
lxml>=4.6.5
lxml>=4.9.4

[alphaomega:platform_system != "Windows"]
zugbruecke>=0.2.1

[audio]
ndx-sound>=0.2.0

[aws]
boto3

[axona]
spikeinterface>=0.101.0
neo>=0.13.2
natsort>=7.1.1
MEArec>=1.8.0
lxml>=4.6.5

[behavior]
ndx-miniscope>=0.5.1
natsort>=8.3.1
ndx-pose==0.1.1
neuroconv[video]
ndx-events==0.2.0
opencv-python-headless>=4.5.1.48
ndx-sound>=0.2.0
av>=10.0.0

[behavior:python_version < "3.9"]
sleap-io<0.0.12,>=0.0.2

[behavior:python_version >= "3.9"]
sleap-io>=0.0.2

[behavior:sys_platform == "darwin"]
tables<3.9.2
opencv-python-headless<4.7.0.72,>=4.5.1.48

[behavior:sys_platform == "darwin" and python_version >= "3.11"]
opencv-python-headless<4.7,>=4.5.1.48

[behavior:sys_platform == "linux" or sys_platform == "win32"]
tables

[biocam]
spikeinterface>=0.101.0
neo>=0.13.2
natsort>=7.1.1
MEArec>=1.8.0
lxml>=4.6.5
lxml>=4.9.4

[biocam:platform_system != "Windows"]
zugbruecke>=0.2.1

[blackrock]
spikeinterface>=0.101.0
neo>=0.13.2
natsort>=7.1.1
MEArec>=1.8.0
lxml>=4.6.5
lxml>=4.9.4
pyedflib>=0.1.36

[blackrock:platform_system != "Windows"]
zugbruecke>=0.2.1

[brukertiff]
roiextractors>=0.5.7
ndx-miniscope>=0.5.1
natsort>=8.3.1
tifffile>=2023.3.21
tdt
ndx-fiber-photometry
scanimage-tiff-reader>=1.4.1
tiffile>=2018.10.18

[caiman]
roiextractors>=0.5.7
ndx-miniscope>=0.5.1
natsort>=8.3.1
tifffile>=2023.3.21
tdt
ndx-fiber-photometry
scanimage-tiff-reader>=1.4.1

[ced]
spikeinterface>=0.101.0
neo>=0.13.2
natsort>=7.1.1
MEArec>=1.8.0
lxml>=4.6.5

[cellexplorer]
spikeinterface>=0.101.0
neo>=0.13.2
natsort>=7.1.1
MEArec>=1.8.0
lxml>=4.6.5
lxml>=4.9.4
pyedflib>=0.1.36
hdf5storage>=0.1.18
pymatreader>=0.0.32

[cellexplorer:platform_system != "Windows"]
zugbruecke>=0.2.1

[cellexplorer:python_version == "3.9"]
sonpy>=1.7.1

[cnmfe]
roiextractors>=0.5.7
ndx-miniscope>=0.5.1
natsort>=8.3.1
tifffile>=2023.3.21
tdt
ndx-fiber-photometry
scanimage-tiff-reader>=1.4.1
tiffile>=2018.10.18

[compressors]
hdf5plugin

[csv]

[dandi]
dandi>=0.58.1

[deeplabcut]
ndx-pose==0.1.1
neuroconv[video]

[deeplabcut:sys_platform == "darwin"]
tables<3.9.2

[deeplabcut:sys_platform == "linux" or sys_platform == "win32"]
tables

[docs]
Jinja2<3.1
Sphinx==5.1.1
sphinx_rtd_theme==1.0.0
readthedocs-sphinx-search==0.1.2
sphinx-toggleprompt==0.2.0
sphinx-copybutton==0.5.0
roiextractors
spikeinterface>=0.101.0
pydata_sphinx_theme==0.12.0

[ecephys]
spikeinterface>=0.101.0
neo>=0.13.2
natsort>=7.1.1
MEArec>=1.8.0
lxml>=4.6.5
lxml>=4.9.4
pyedflib>=0.1.36
hdf5storage>=0.1.18
pymatreader>=0.0.32

[ecephys:platform_system != "Windows"]
zugbruecke>=0.2.1

[ecephys:python_version == "3.9"]
sonpy>=1.7.1

[edf]
spikeinterface>=0.101.0
neo>=0.13.2
natsort>=7.1.1
MEArec>=1.8.0
lxml>=4.6.5
lxml>=4.9.4
pyedflib>=0.1.36

[edf:platform_system != "Windows"]
zugbruecke>=0.2.1

[excel]
openpyxl
xlrd

[extract]
roiextractors>=0.5.7
ndx-miniscope>=0.5.1
natsort>=8.3.1
tifffile>=2023.3.21
tdt
ndx-fiber-photometry
scanimage-tiff-reader>=1.4.1
tiffile>=2018.10.18

[fictrac]

[full]
dandi>=0.58.1
hdf5plugin
roiextractors>=0.5.7
ndx-miniscope>=0.5.1
natsort>=8.3.1
tifffile>=2023.3.21
tdt
ndx-fiber-photometry
scanimage-tiff-reader>=1.4.1
tiffile>=2018.10.18
spikeinterface>=0.101.0
neo>=0.13.2
natsort>=7.1.1
MEArec>=1.8.0
lxml>=4.6.5
lxml>=4.9.4
pyedflib>=0.1.36
hdf5storage>=0.1.18
pymatreader>=0.0.32
ndx-dandi-icephys>=0.4.0
ndx-pose==0.1.1
neuroconv[video]
ndx-events==0.2.0
opencv-python-headless>=4.5.1.48
ndx-sound>=0.2.0
av>=10.0.0
openpyxl
xlrd

[full:platform_system != "Windows"]
zugbruecke>=0.2.1

[full:python_version < "3.9"]
sleap-io<0.0.12,>=0.0.2

[full:python_version == "3.9"]
sonpy>=1.7.1

[full:python_version >= "3.9"]
sleap-io>=0.0.2

[full:sys_platform == "darwin"]
tables<3.9.2
opencv-python-headless<4.7.0.72,>=4.5.1.48

[full:sys_platform == "darwin" and python_version >= "3.11"]
opencv-python-headless<4.7,>=4.5.1.48

[full:sys_platform == "linux" or sys_platform == "win32"]
tables

[hdf5]
roiextractors>=0.5.7
ndx-miniscope>=0.5.1
natsort>=8.3.1
tifffile>=2023.3.21
tdt
ndx-fiber-photometry
scanimage-tiff-reader>=1.4.1

[icephys]
neo>=0.13.2
ndx-dandi-icephys>=0.4.0

[intan]
spikeinterface>=0.101.0
neo>=0.13.2
natsort>=7.1.1
MEArec>=1.8.0
lxml>=4.6.5
lxml>=4.9.4

[intan:platform_system != "Windows"]
zugbruecke>=0.2.1

[kilosort]
spikeinterface>=0.101.0
neo>=0.13.2
natsort>=7.1.1

[lightningpose]
ndx-pose==0.1.1
neuroconv[video]

[maxwell]
spikeinterface>=0.101.0
neo>=0.13.2
natsort>=7.1.1
MEArec>=1.8.0
lxml>=4.6.5
lxml>=4.9.4

[maxwell:platform_system != "Windows"]
zugbruecke>=0.2.1

[mcsraw]
spikeinterface>=0.101.0
neo>=0.13.2
natsort>=7.1.1
MEArec>=1.8.0
lxml>=4.6.5
lxml>=4.9.4
pyedflib>=0.1.36

[mcsraw:platform_system != "Windows"]
zugbruecke>=0.2.1

[mearec]
spikeinterface>=0.101.0
neo>=0.13.2
natsort>=7.1.1
MEArec>=1.8.0

[medpc]
ndx-events==0.2.0

[micromanagertiff]
roiextractors>=0.5.7
ndx-miniscope>=0.5.1
natsort>=8.3.1
tifffile>=2023.3.21

[miniscope]
ndx-miniscope>=0.5.1
natsort>=8.3.1

[neuralynx]

[neuroscope]
spikeinterface>=0.101.0
neo>=0.13.2
natsort>=7.1.1
MEArec>=1.8.0
lxml>=4.6.5

[openephys]
spikeinterface>=0.101.0
neo>=0.13.2
natsort>=7.1.1
MEArec>=1.8.0
lxml>=4.6.5
lxml>=4.9.4

[openephys:platform_system != "Windows"]
zugbruecke>=0.2.1

[ophys]
roiextractors>=0.5.7
ndx-miniscope>=0.5.1
natsort>=8.3.1
tifffile>=2023.3.21
tdt
ndx-fiber-photometry
scanimage-tiff-reader>=1.4.1
tiffile>=2018.10.18

[phy]
spikeinterface>=0.101.0
neo>=0.13.2
natsort>=7.1.1
MEArec>=1.8.0
lxml>=4.6.5

[plexon]
spikeinterface>=0.101.0
neo>=0.13.2
natsort>=7.1.1
MEArec>=1.8.0
lxml>=4.6.5

[plexon:platform_system != "Windows"]
zugbruecke>=0.2.1

[sbx]
roiextractors>=0.5.7
ndx-miniscope>=0.5.1
natsort>=8.3.1
tifffile>=2023.3.21
tdt
ndx-fiber-photometry
scanimage-tiff-reader>=1.4.1
tiffile>=2018.10.18

[scanimage]
roiextractors>=0.5.7
ndx-miniscope>=0.5.1
natsort>=8.3.1
tifffile>=2023.3.21
tdt
ndx-fiber-photometry
scanimage-tiff-reader>=1.4.1

[sima]
roiextractors>=0.5.7
ndx-miniscope>=0.5.1
natsort>=8.3.1
tifffile>=2023.3.21
tdt
ndx-fiber-photometry
scanimage-tiff-reader>=1.4.1
tiffile>=2018.10.18

[sleap]
av>=10.0.0

[sleap:python_version < "3.9"]
sleap-io<0.0.12,>=0.0.2

[sleap:python_version >= "3.9"]
sleap-io>=0.0.2

[spike2]
spikeinterface>=0.101.0
neo>=0.13.2
natsort>=7.1.1
MEArec>=1.8.0
lxml>=4.6.5
lxml>=4.9.4
pyedflib>=0.1.36

[spike2:platform_system != "Windows"]
zugbruecke>=0.2.1

[spike2:python_version == "3.9"]
sonpy>=1.7.1

[spikegadgets]
spikeinterface>=0.101.0
neo>=0.13.2
natsort>=7.1.1
MEArec>=1.8.0
lxml>=4.6.5

[spikeglx]
spikeinterface>=0.101.0
neo>=0.13.2
natsort>=7.1.1
MEArec>=1.8.0
lxml>=4.6.5
lxml>=4.9.4

[spikeglx:platform_system != "Windows"]
zugbruecke>=0.2.1

[spikeinterface]
spikeinterface>=0.101.0
neo>=0.13.2
natsort>=7.1.1
MEArec>=1.8.0
lxml>=4.6.5

[suite2p]
roiextractors>=0.5.7
ndx-miniscope>=0.5.1
natsort>=8.3.1
tifffile>=2023.3.21
tdt
ndx-fiber-photometry
scanimage-tiff-reader>=1.4.1

[tdt]
spikeinterface>=0.101.0
neo>=0.13.2
natsort>=7.1.1
MEArec>=1.8.0

[tdt_fp]
roiextractors>=0.5.7
ndx-miniscope>=0.5.1
natsort>=8.3.1
tifffile>=2023.3.21
tdt
ndx-fiber-photometry

[test]
pytest
pytest-cov
ndx-events>=0.2.0
parameterized>=0.8.1
ndx-miniscope
spikeinterface[qualitymetrics]>=0.101.0
zarr<2.18.0
pytest-xdist

[text]
openpyxl
xlrd

[tiff]
roiextractors>=0.5.7
ndx-miniscope>=0.5.1
natsort>=8.3.1
tifffile>=2023.3.21
tdt
ndx-fiber-photometry
scanimage-tiff-reader>=1.4.1
tiffile>=2018.10.18

[video]
opencv-python-headless>=4.5.1.48

[video:sys_platform == "darwin"]
opencv-python-headless<4.7.0.72,>=4.5.1.48

[video:sys_platform == "darwin" and python_version >= "3.11"]
opencv-python-headless<4.7,>=4.5.1.48
