LICENSE
README.md
pyproject.toml
requirements.txt
src/neura_library.egg-info/PKG-INFO
src/neura_library.egg-info/SOURCES.txt
src/neura_library.egg-info/dependency_links.txt
src/neura_library.egg-info/entry_points.txt
src/neura_library.egg-info/requires.txt
src/neura_library.egg-info/top_level.txt
src/neuralib/__init__.py
src/neuralib/argp/__init__.py
src/neuralib/argp/_type.py
src/neuralib/argp/core.py
src/neuralib/argp/dispatch.py
src/neuralib/atlas/__init__.py
src/neuralib/atlas/allen.py
src/neuralib/atlas/map.py
src/neuralib/atlas/plot.py
src/neuralib/atlas/type.py
src/neuralib/atlas/util.py
src/neuralib/atlas/view.py
src/neuralib/atlas/brainrender/__init__.py
src/neuralib/atlas/brainrender/core.py
src/neuralib/atlas/brainrender/example.py
src/neuralib/atlas/brainrender/main_app.py
src/neuralib/atlas/brainrender/probe_rst.py
src/neuralib/atlas/brainrender/roi_rst.py
src/neuralib/atlas/brainrender/util.py
src/neuralib/atlas/ccf/__init__.py
src/neuralib/atlas/ccf/classifier.py
src/neuralib/atlas/ccf/core.py
src/neuralib/atlas/ccf/norm.py
src/neuralib/atlas/ccf/query.py
src/neuralib/atlas/cellatlas/__init__.py
src/neuralib/atlas/cellatlas/core.py
src/neuralib/atlas/ibl/__init__.py
src/neuralib/atlas/ibl/plot.py
src/neuralib/bokeh_model/__init__.py
src/neuralib/bokeh_model/base.py
src/neuralib/bokeh_model/example.py
src/neuralib/bokeh_model/example_multi.py
src/neuralib/bokeh_model/tool.py
src/neuralib/bokeh_model/util.py
src/neuralib/bokeh_model/view_brain.py
src/neuralib/bokeh_model/examples/__init__.py
src/neuralib/bokeh_model/examples/__main__.py
src/neuralib/bokeh_model/examples/model.py
src/neuralib/bokeh_model/examples/view_all.py
src/neuralib/bokeh_model/examples/view_animal.py
src/neuralib/bokeh_model/examples/view_figure.py
src/neuralib/calimg/__init__.py
src/neuralib/calimg/scan_image/__init__.py
src/neuralib/calimg/scan_image/wrapper.py
src/neuralib/calimg/scanbox/__init__.py
src/neuralib/calimg/scanbox/core.py
src/neuralib/calimg/scanbox/viewer.py
src/neuralib/calimg/suite2p/__init__.py
src/neuralib/calimg/suite2p/core.py
src/neuralib/calimg/suite2p/signals.py
src/neuralib/imglib/__init__.py
src/neuralib/imglib/factory.py
src/neuralib/imglib/io.py
src/neuralib/imglib/labeller.py
src/neuralib/imglib/norm.py
src/neuralib/model/__init__.py
src/neuralib/model/bayes_decoding/__init__.py
src/neuralib/model/bayes_decoding/position.py
src/neuralib/persistence/__init__.py
src/neuralib/persistence/cli_persistence.py
src/neuralib/persistence/persistence.py
src/neuralib/plot/__init__.py
src/neuralib/plot/animation.py
src/neuralib/plot/colormap.py
src/neuralib/plot/figure.py
src/neuralib/plot/misc.py
src/neuralib/plot/plot.py
src/neuralib/plot/setting.py
src/neuralib/plot/tools.py
src/neuralib/plot/venn.py
src/neuralib/scanner/__init__.py
src/neuralib/scanner/core.py
src/neuralib/scanner/czi.py
src/neuralib/scanner/lsm.py
src/neuralib/segmentation/__init__.py
src/neuralib/segmentation/base.py
src/neuralib/segmentation/cellpose/__init__.py
src/neuralib/segmentation/cellpose/core.py
src/neuralib/segmentation/cellpose/run_api.py
src/neuralib/segmentation/cellpose/run_subproc.py
src/neuralib/segmentation/stardist/__init__.py
src/neuralib/segmentation/stardist/run_2d.py
src/neuralib/stimpy/__init__.py
src/neuralib/stimpy/baselog.py
src/neuralib/stimpy/baseprot.py
src/neuralib/stimpy/camlog.py
src/neuralib/stimpy/event.py
src/neuralib/stimpy/math_eval.py
src/neuralib/stimpy/preference.py
src/neuralib/stimpy/protocol_parser.py
src/neuralib/stimpy/session.py
src/neuralib/stimpy/stimpy_core.py
src/neuralib/stimpy/stimpy_git.py
src/neuralib/stimpy/stimpy_pyv.py
src/neuralib/stimpy/stimulus.py
src/neuralib/stimpy/util.py
src/neuralib/tools/__init__.py
src/neuralib/tools/pkl_parq_view/__init__.py
src/neuralib/tools/pkl_parq_view/main_app.py
src/neuralib/tools/slack_bot/__init__.py
src/neuralib/tools/slack_bot/bot.py
src/neuralib/util/__init__.py
src/neuralib/util/cli_args.py
src/neuralib/util/color_logging.py
src/neuralib/util/csv.py
src/neuralib/util/func.py
src/neuralib/util/gpu.py
src/neuralib/util/io.py
src/neuralib/util/json.py
src/neuralib/util/profile_test.py
src/neuralib/util/segement.py
src/neuralib/util/table.py
src/neuralib/util/tqdm.py
src/neuralib/util/util_cv2.py
src/neuralib/util/util_type.py
src/neuralib/util/util_verbose.py
src/neuralib/util/utils.py
src/neuralib/util/version.py
src/neuralib/wrapper/__init__.py
src/neuralib/wrapper/deeplabcut/__init__.py
src/neuralib/wrapper/deeplabcut/core.py
src/neuralib/wrapper/deeplabcut/util.py
src/neuralib/wrapper/facemap/__init__.py
src/neuralib/wrapper/facemap/core.py
src/neuralib/wrapper/facemap/plot.py
src/neuralib/wrapper/rastermap/__init__.py
src/neuralib/wrapper/rastermap/core.py
test/test_argp.py
test/test_argp_dispatch.py
test/test_csv_context_manager.py
test/test_persistence_autoinc.py
test/test_protocol_parser.py
test/test_pyvstim_parser.py
test/test_stimpy_bitbucket_parser.py
test/test_stimpy_github_parser.py