LICENSE.txt
README.md
setup.py
src/NEMtropy/__init__.py
src/NEMtropy/ensemble_functions.py
src/NEMtropy/ensemble_generator.py
src/NEMtropy/graph_classes.py
src/NEMtropy/matrix_generator.py
src/NEMtropy/models_functions.py
src/NEMtropy/network_functions.py
src/NEMtropy/solver_functions.py
src/NEMtropy.egg-info/PKG-INFO
src/NEMtropy.egg-info/SOURCES.txt
src/NEMtropy.egg-info/dependency_links.txt
src/NEMtropy.egg-info/requires.txt
src/NEMtropy.egg-info/top_level.txt
tests/test_2motifs.py
tests/test_2motifs_sparse.py
tests/test_3motifs_count.py
tests/test_3motifs_sparse.py
tests/test_3motifs_zscore.py
tests/test_ensemble_sampler_cm.py
tests/test_ensemble_sampler_creama_decm_det.py
tests/test_ensemble_sampler_creama_decm_prob.py
tests/test_ensemble_sampler_creama_ecm_det.py
tests/test_ensemble_sampler_creama_ecm_prob.py
tests/test_ensemble_sampler_creama_sparse_decm_prob.py
tests/test_ensemble_sampler_creama_sparse_ecm_prob.py
tests/test_ensemble_sampler_dcm.py
tests/test_ensemble_sampler_decm.py
tests/test_ensemble_sampler_ecm.py
tests/test_ensemble_seed.py
tests/test_init.py
tests/test_initial_guess.py
tests/test_loglikelihood_dcm.py
tests/test_loglikelihood_dcm_new.py
tests/test_loglikelihood_decm.py
tests/test_loglikelihood_decm_new.py
tests/test_model_loglikelihood.py
tests/test_reduction.py
tests/test_solve_problem_cm-new_fixedpoint.py
tests/test_solve_problem_cm-new_newton.py
tests/test_solve_problem_cm-new_quasinewton.py
tests/test_solve_problem_cm_fixedpoint.py
tests/test_solve_problem_cm_newton.py
tests/test_solve_problem_cm_quasinewton.py
tests/test_solve_problem_dcm_fixedpoint.py
tests/test_solve_problem_dcm_new_fixedpoint.py
tests/test_solve_problem_dcm_new_newton.py
tests/test_solve_problem_dcm_new_quasinewton.py
tests/test_solve_problem_dcm_newton.py
tests/test_solve_problem_dcm_quasinewton.py
tests/test_solve_problem_decm_fixedpoint.py
tests/test_solve_problem_decm_new_fixedpoint.py
tests/test_solve_problem_decm_new_newton.py
tests/test_solve_problem_decm_new_quasinewton.py
tests/test_solve_problem_decm_newton.py
tests/test_solve_problem_decm_quasinewton.py
tests/test_solve_tool.py
tests/test_solve_tool_CReAMa_fixedpoint.py
tests/test_solve_tool_CReAMa_newton.py
tests/test_solve_tool_CReAMa_quasinewton.py
tests/test_solve_tool_ecm-new_fixedpoint.py
tests/test_solve_tool_ecm-new_newton.py
tests/test_solve_tool_ecm-new_quasinewton.py
tests/test_solve_tool_ecm_fixedpoint.py
tests/test_solve_tool_ecm_newton.py
tests/test_solve_tool_ecm_quasinewton.py
tests/test_solver_dcm_new.py
tests/test_solver_decm_new.py