Jinja2
PyYAML==6.*
click==8.*
click-logging
fs==2.4.*
fs-gcsfs==1.5.*
igraph
matplotlib==3.*
numpy==1.26.*
pandas==1.5.*
pydantic==2.*
python-libsbml
requests>=2
scipy==1.14.*
tqdm
zeep==3.*

[dev]
black==25.*
ipykernel
pre-commit==3.3.*
pytest==7.*
pytest-cov
ruff
testcontainers

[rpy2]
pyarrow==18.0.0
rpy2==3.5.*
rpy2-arrow==0.1.1
