CHANGELOG.txt
LICENSE.txt
MANIFEST.in
README.md
pyproject.toml
requirements.txt
src/nanovar/__init__.py
src/nanovar/nanovar.py
src/nanovar/nv_align.py
src/nanovar/nv_alt_seq.py
src/nanovar/nv_bam_parser.c
src/nanovar/nv_bam_parser.pyx
src/nanovar/nv_characterize.py
src/nanovar/nv_cluster.py
src/nanovar/nv_cov_upper.py
src/nanovar/nv_detect_algo.py
src/nanovar/nv_dup_te_detect.py
src/nanovar/nv_input.py
src/nanovar/nv_nn.py
src/nanovar/nv_parser.py
src/nanovar/nv_report.py
src/nanovar/nv_supp_bam.py
src/nanovar/nv_te_analyzer.py
src/nanovar/nv_valid.py
src/nanovar/nv_vcf.py
src/nanovar/version.py
src/nanovar.egg-info/PKG-INFO
src/nanovar.egg-info/SOURCES.txt
src/nanovar.egg-info/dependency_links.txt
src/nanovar.egg-info/entry_points.txt
src/nanovar.egg-info/requires.txt
src/nanovar.egg-info/top_level.txt
src/nanovar/css/__init__.py
src/nanovar/css/bootstrap.min.css
src/nanovar/css/buttons.dataTables.min.css
src/nanovar/css/font-awesome.min.css
src/nanovar/css/jquery.dataTables.min.css
src/nanovar/css/mdb.min.css
src/nanovar/gaps/__init__.py
src/nanovar/gaps/hg19_filter-B400.bed
src/nanovar/gaps/hg38_curated_filter_main.bed
src/nanovar/gaps/mm10_filter-B400.bed
src/nanovar/js/__init__.py
src/nanovar/js/bootstrap.min.js
src/nanovar/js/buttons.flash.min.js
src/nanovar/js/buttons.html5.min.js
src/nanovar/js/dataTables.buttons.min.js
src/nanovar/js/jquery-3.3.1.min.js
src/nanovar/js/jquery.dataTables.min.js
src/nanovar/js/jszip.min.js
src/nanovar/js/mdb.min.js
src/nanovar/js/popper.min.js
src/nanovar/model/ANN.E100B400L3N12-5D0.4-0.2SGDsee11_het_ccs_v1.h5
src/nanovar/model/ANN.E100B400L3N12-5D0.4-0.2SGDsee11_het_clr_v1.h5
src/nanovar/model/ANN.E100B400L3N12-5D0.4-0.2SGDsee11_het_gup_v1.h5
src/nanovar/model/__init__.py
src/nanovar/ref/hg38_L1_Alu.counts.obinary
src/nanovar/ref/hg38_L1_Alu.fa