Metadata-Version: 1.1
Name: nanoQC
Version: 0.4.2
Summary: Create fastQC-like plots for Oxford Nanopore sequencing data
Home-page: https://github.com/wdecoster/nanoQC
Author: Wouter De Coster
Author-email: decosterwouter@gmail.com
License: MIT
Description: nanoQC
        ======
        
        Quality control tools for Oxford Nanopore sequencing data aiming to
        replicate some of the plots made by fastQC.
        
        |Twitter URL| |install with conda| |Code Health|
        
        For an example see my blog `Gigabase or
        gigabyte <https://gigabaseorgigabyte.wordpress.com/2017/06/15/per-base-sequence-content-and-quality-end-of-reads/>`__
        
        INSTALLATION
        ------------
        
        .. code:: bash
        
            pip install nanoQC
        
        | or
        | |install with conda|
        
        ::
        
            conda install -c bioconda nanoqc
        
        USAGE
        -----
        
        ::
        
            nanoQC [-h] [-v] [--outdir OUTDIR] fastq
        
            positional arguments:
              fastq            Reads data in fastq format.
        
            optional arguments:
              -h, --help       show this help message and exit
              -v, --version    Print version and exit.
              --outdir OUTDIR  Specify directory in which output has to be created.
        
        STATUS
        ------
        
        |Code Health|
        
        .. |Twitter URL| image:: https://img.shields.io/twitter/url/https/twitter.com/wouter_decoster.svg?style=social&label=Follow%20%40wouter_decoster
           :target: https://twitter.com/wouter_decoster
        .. |install with conda| image:: https://anaconda.org/bioconda/nanoqc/badges/installer/conda.svg
           :target: https://anaconda.org/bioconda/nanoqc
        .. |Code Health| image:: https://landscape.io/github/wdecoster/nanoQC/master/landscape.svg?style=flat
           :target: https://landscape.io/github/wdecoster/nanoQC/master
        
Keywords: nanopore sequencing statistics
Platform: UNKNOWN
Classifier: Development Status :: 4 - Beta
Classifier: Intended Audience :: Science/Research
Classifier: Topic :: Scientific/Engineering :: Bio-Informatics
Classifier: License :: OSI Approved :: MIT License
Classifier: Programming Language :: Python :: 3
Classifier: Programming Language :: Python :: 3.3
Classifier: Programming Language :: Python :: 3.4
Classifier: Programming Language :: Python :: 3.5
