LICENSE.txt
MANIFEST.in
README.md
setup.py
myokit/__init__.py
myokit/__main__.py
myokit/_aux.py
myokit/_config.py
myokit/_datablock.py
myokit/_datalog.py
myokit/_err.py
myokit/_expressions.py
myokit/_io.py
myokit/_model_api.py
myokit/_myokit_version.py
myokit/_parsing.py
myokit/_progress.py
myokit/_protocol.py
myokit/_system.py
myokit/_unit.py
myokit/float.py
myokit/pacing.py
myokit/pype.py
myokit/tools.py
myokit/units.py
myokit.egg-info/PKG-INFO
myokit.egg-info/SOURCES.txt
myokit.egg-info/dependency_links.txt
myokit.egg-info/entry_points.txt
myokit.egg-info/not-zip-safe
myokit.egg-info/requires.txt
myokit.egg-info/top_level.txt
myokit/_bin/example.mmt
myokit/_bin/gui/find.png
myokit/_bin/gui/icon-datablock-viewer-128.xpm
myokit/_bin/gui/icon-datablock-viewer-16.xpm
myokit/_bin/gui/icon-datablock-viewer-24.xpm
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myokit/_bin/gui/icon-datablock-viewer.ico
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myokit/_bin/gui/icon-ide-16.xpm
myokit/_bin/gui/icon-ide-24.xpm
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myokit/_bin/gui/icon-ide-32.xpm
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myokit/_bin/gui/new.png
myokit/_bin/gui/open.png
myokit/_bin/gui/redo.png
myokit/_bin/gui/run.png
myokit/_bin/gui/save.png
myokit/_bin/gui/undo.png
myokit/_bin/install-lin/myokit-datablock-viewer.desktop
myokit/_bin/install-lin/myokit-datalog-viewer.desktop
myokit/_bin/install-lin/myokit-ide.desktop
myokit/_bin/install-lin/myokit.lang
myokit/_bin/install-lin/x-abf.xml
myokit/_bin/install-lin/x-cellml.xml
myokit/_bin/install-lin/x-myokit.xml
myokit/_bin/install-lin/x-wcp.xml
myokit/_bin/install-win/menu.json
myokit/_bin/sundials-win-vs/LICENSE
myokit/_bin/sundials-win-vs/include/cvodes/cvodes.h
myokit/_bin/sundials-win-vs/include/cvodes/cvodes_direct.h
myokit/_bin/sundials-win-vs/include/cvodes/cvodes_ls.h
myokit/_bin/sundials-win-vs/include/nvector/nvector_serial.h
myokit/_bin/sundials-win-vs/include/sundials/sundials_config.h
myokit/_bin/sundials-win-vs/include/sundials/sundials_dense.h
myokit/_bin/sundials-win-vs/include/sundials/sundials_direct.h
myokit/_bin/sundials-win-vs/include/sundials/sundials_export.h
myokit/_bin/sundials-win-vs/include/sundials/sundials_iterative.h
myokit/_bin/sundials-win-vs/include/sundials/sundials_linearsolver.h
myokit/_bin/sundials-win-vs/include/sundials/sundials_matrix.h
myokit/_bin/sundials-win-vs/include/sundials/sundials_nonlinearsolver.h
myokit/_bin/sundials-win-vs/include/sundials/sundials_nvector.h
myokit/_bin/sundials-win-vs/include/sundials/sundials_types.h
myokit/_bin/sundials-win-vs/include/sundials/sundials_version.h
myokit/_bin/sundials-win-vs/include/sunlinsol/sunlinsol_dense.h
myokit/_bin/sundials-win-vs/include/sunmatrix/sunmatrix_dense.h
myokit/_bin/sundials-win-vs/lib/sundials_cvodes.dll
myokit/_bin/sundials-win-vs/lib/sundials_cvodes.lib
myokit/_bin/sundials-win-vs/lib/sundials_nvecserial.dll
myokit/_bin/sundials-win-vs/lib/sundials_nvecserial.lib
myokit/_sim/__init__.py
myokit/_sim/cable.c
myokit/_sim/cable.py
myokit/_sim/cmodel.h
myokit/_sim/cmodel.py
myokit/_sim/compiler.c
myokit/_sim/compiler.py
myokit/_sim/cvodessim.c
myokit/_sim/cvodessim.py
myokit/_sim/differential.hpp
myokit/_sim/fiber_tissue.c
myokit/_sim/fiber_tissue.py
myokit/_sim/jacobian.cpp
myokit/_sim/jacobian.py
myokit/_sim/mcl.h
myokit/_sim/opencl.c
myokit/_sim/opencl.py
myokit/_sim/openclsim.c
myokit/_sim/openclsim.cl
myokit/_sim/openclsim.py
myokit/_sim/pacing.h
myokit/_sim/rhs.c
myokit/_sim/rhs.py
myokit/_sim/sundials.c
myokit/_sim/sundials.py
myokit/formats/__init__.py
myokit/formats/ansic/__init__.py
myokit/formats/ansic/_ewriter.py
myokit/formats/ansic/_exporter.py
myokit/formats/ansic/template/cable.c
myokit/formats/ansic/template/euler.c
myokit/formats/ansic/template/sim.c
myokit/formats/axon/__init__.py
myokit/formats/axon/_abf.py
myokit/formats/axon/_atf.py
myokit/formats/axon/_importer.py
myokit/formats/cellml/__init__.py
myokit/formats/cellml/_ewriter.py
myokit/formats/cellml/_exporter.py
myokit/formats/cellml/_importer.py
myokit/formats/cellml/v1/__init__.py
myokit/formats/cellml/v1/_api.py
myokit/formats/cellml/v1/_parser.py
myokit/formats/cellml/v1/_writer.py
myokit/formats/cellml/v2/__init__.py
myokit/formats/cellml/v2/_api.py
myokit/formats/cellml/v2/_parser.py
myokit/formats/cellml/v2/_writer.py
myokit/formats/channelml/__init__.py
myokit/formats/channelml/_importer.py
myokit/formats/cpp/__init__.py
myokit/formats/cpp/_ewriter.py
myokit/formats/cuda/__init__.py
myokit/formats/cuda/_ewriter.py
myokit/formats/cuda/_exporter.py
myokit/formats/cuda/template/kernel.cu
myokit/formats/easyml/__init__.py
myokit/formats/easyml/_ewriter.py
myokit/formats/easyml/_exporter.py
myokit/formats/heka/__init__.py
myokit/formats/heka/_importer.py
myokit/formats/heka/_patchmaster.py
myokit/formats/html/__init__.py
myokit/formats/html/_exporter.py
myokit/formats/html/_flatten.py
myokit/formats/latex/__init__.py
myokit/formats/latex/_ewriter.py
myokit/formats/latex/_exporter.py
myokit/formats/mathml/__init__.py
myokit/formats/mathml/_ewriter.py
myokit/formats/mathml/_parser.py
myokit/formats/matlab/__init__.py
myokit/formats/matlab/_ewriter.py
myokit/formats/matlab/_exporter.py
myokit/formats/matlab/template/constants.m
myokit/formats/matlab/template/ifthenelse.m
myokit/formats/matlab/template/main.m
myokit/formats/matlab/template/model.m
myokit/formats/matlab/template/model_wrapper.m
myokit/formats/opencl/__init__.py
myokit/formats/opencl/_ewriter.py
myokit/formats/opencl/_exporter.py
myokit/formats/opencl/template/cable.c
myokit/formats/opencl/template/kernel.cl
myokit/formats/opencl/template/minilog.py
myokit/formats/opencl/template/plot.py
myokit/formats/opencl/template/test.sh
myokit/formats/python/__init__.py
myokit/formats/python/_ewriter.py
myokit/formats/python/_exporter.py
myokit/formats/python/template/sim.py
myokit/formats/sbml/__init__.py
myokit/formats/sbml/_api.py
myokit/formats/sbml/_importer.py
myokit/formats/sbml/_parser.py
myokit/formats/stan/__init__.py
myokit/formats/stan/_ewriter.py
myokit/formats/stan/_exporter.py
myokit/formats/stan/template/cell.stan
myokit/formats/stan/template/run.py
myokit/formats/sympy/__init__.py
myokit/formats/sympy/_ereader.py
myokit/formats/sympy/_ewriter.py
myokit/formats/wcp/__init__.py
myokit/formats/wcp/_wcp.py
myokit/formats/xml/__init__.py
myokit/formats/xml/_exporter.py
myokit/formats/xml/_split.py
myokit/gui/__init__.py
myokit/gui/datablock_viewer.py
myokit/gui/datalog_viewer.py
myokit/gui/explorer.py
myokit/gui/ide.py
myokit/gui/progress.py
myokit/gui/source.py
myokit/gui/vargrapher.py
myokit/lib/__init__.py
myokit/lib/deps.py
myokit/lib/guess.py
myokit/lib/hh.py
myokit/lib/markov.py
myokit/lib/multi.py
myokit/lib/plots.py
myokit/tests/__init__.py
myokit/tests/ansic_event_based_pacing.py
myokit/tests/ansic_time_series_pacing.py
myokit/tests/test_aux.py
myokit/tests/test_cellml_v1_api.py
myokit/tests/test_cellml_v1_parser.py
myokit/tests/test_cellml_v1_writer.py
myokit/tests/test_cellml_v2_api.py
myokit/tests/test_cellml_v2_parser.py
myokit/tests/test_cellml_v2_writer.py
myokit/tests/test_cmodel.py
myokit/tests/test_compiler_detection.py
myokit/tests/test_component.py
myokit/tests/test_config.py
myokit/tests/test_datablock.py
myokit/tests/test_datalog.py
myokit/tests/test_dependency_checking.py
myokit/tests/test_expressions.py
myokit/tests/test_float.py
myokit/tests/test_formats.py
myokit/tests/test_formats_axon.py
myokit/tests/test_formats_cellml.py
myokit/tests/test_formats_channelml.py
myokit/tests/test_formats_easyml.py
myokit/tests/test_formats_exporters.py
myokit/tests/test_formats_expression_writers.py
myokit/tests/test_formats_html.py
myokit/tests/test_formats_importers.py
myokit/tests/test_formats_mathml_content.py
myokit/tests/test_formats_mathml_presentation.py
myokit/tests/test_formats_opencl.py
myokit/tests/test_formats_sbml.py
myokit/tests/test_formats_sympy.py
myokit/tests/test_formats_wcp.py
myokit/tests/test_io.py
myokit/tests/test_jacobian_calculator.py
myokit/tests/test_jacobian_tracer.py
myokit/tests/test_lib_deps.py
myokit/tests/test_lib_guess.py
myokit/tests/test_lib_hh.py
myokit/tests/test_lib_markov.py
myokit/tests/test_lib_multi.py
myokit/tests/test_lib_plots.py
myokit/tests/test_meta.py
myokit/tests/test_model.py
myokit/tests/test_model_building.py
myokit/tests/test_opencl_info.py
myokit/tests/test_pacing_factory.py
myokit/tests/test_pacing_system_c.py
myokit/tests/test_pacing_system_py.py
myokit/tests/test_parsing.py
myokit/tests/test_progress_reporters.py
myokit/tests/test_protocol.py
myokit/tests/test_protocol_floating_point.py
myokit/tests/test_protocol_time_series.py
myokit/tests/test_pype.py
myokit/tests/test_quantity.py
myokit/tests/test_rhs_benchmarker.py
myokit/tests/test_sbml_api.py
myokit/tests/test_sbml_parser.py
myokit/tests/test_simulation_1d.py
myokit/tests/test_simulation_cvodes.py
myokit/tests/test_simulation_cvodes_from_disk.py
myokit/tests/test_simulation_fiber_tissue.py
myokit/tests/test_simulation_log_interval.py
myokit/tests/test_simulation_opencl.py
myokit/tests/test_simulation_opencl_log_interval.py
myokit/tests/test_simulation_opencl_vs_cvode.py
myokit/tests/test_simulation_opencl_vs_sim1d.py
myokit/tests/test_system_info.py
myokit/tests/test_tools.py
myokit/tests/test_unit.py
myokit/tests/test_user_functions.py
myokit/tests/test_variable.py
myokit/tests/data/beeler-1977-model-compare-a.mmt
myokit/tests/data/beeler-1977-model-compare-b.mmt
myokit/tests/data/beeler-1977-model.mmt
myokit/tests/data/beeler-1977-protocol.mmt
myokit/tests/data/beeler-1977-script.mmt
myokit/tests/data/beeler-1977-units.mmt
myokit/tests/data/clancy-1999-fitting.mmt
myokit/tests/data/conditional.mmt
myokit/tests/data/cv1d.mmt
myokit/tests/data/cv1d.zip
myokit/tests/data/decker-2009.mmt
myokit/tests/data/decker.model
myokit/tests/data/dn-1985-normalised.mmt
myokit/tests/data/dom-markov.mmt
myokit/tests/data/lr-1991-dep.mmt
myokit/tests/data/lr-1991-fitting.mmt
myokit/tests/data/lr-1991-testing.mmt
myokit/tests/data/lr-1991.mmt
myokit/tests/data/noble-1962.mmt
myokit/tests/data/formats/abf-protocol.pro
myokit/tests/data/formats/abf-v1.abf
myokit/tests/data/formats/abf-v2.abf
myokit/tests/data/formats/wcp-file.wcp
myokit/tests/data/formats/cellml/LICENSE
myokit/tests/data/formats/cellml/br-1977-dot.cellml
myokit/tests/data/formats/cellml/br-1977.cellml
myokit/tests/data/formats/cellml/corrias.cellml
myokit/tests/data/formats/cellml/decker-2009.cellml
myokit/tests/data/formats/cellml/documentation.cellml
myokit/tests/data/formats/cellml/invalid-file.cellml
myokit/tests/data/formats/cellml/lr-1991-exported-1.cellml
myokit/tests/data/formats/cellml/lr-1991-exported-2.cellml
myokit/tests/data/formats/channelml/ch-00-valid-file.channelml
myokit/tests/data/formats/channelml/ch-01-wrong-root.channelml
myokit/tests/data/formats/channelml/ch-02-no-channel-type.channelml
myokit/tests/data/formats/channelml/ch-03-overlapping-name.channelml
myokit/tests/data/formats/channelml/ch-04-no-cvr.channelml
myokit/tests/data/formats/channelml/ch-05-two-cvrs.channelml
myokit/tests/data/formats/channelml/ch-06-no-q10.channelml
myokit/tests/data/formats/channelml/ch-07-three-transitions.channelml
myokit/tests/data/formats/channelml/ch-08-no-closed-to-open.channelml
myokit/tests/data/formats/channelml/ch-09-no-open-to-closed.channelml
myokit/tests/data/formats/channelml/ch-10-tco-bad-expression.channelml
myokit/tests/data/formats/channelml/ch-11-toc-bad-expression.channelml
myokit/tests/data/formats/channelml/ch-12-no-steady-state.channelml
myokit/tests/data/formats/channelml/ch-13-no-time-course.channelml
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myokit/tests/data/formats/channelml/ch-15-tau-bad-expression.channelml
myokit/tests/data/formats/channelml/ch-16-no-gates.channelml
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myokit/tests/data/formats/channelml/ch-18-c-style-if.channelml
myokit/tests/data/formats/sbml/00004-sbml-l2v1-modified.xml
myokit/tests/data/formats/sbml/00004-sbml-l3v2-modified.xml
myokit/tests/data/formats/sbml/HodgkinHuxley.xml
myokit/tests/data/formats/sbml/LICENSE
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myokit/tests/data/formats/sbml/model/00004-sbml-l3v2.xml
myokit/tests/data/formats/sbml/model/01103-sbml-l3v2.xml
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