Metadata-Version: 2.0
Name: multiworm
Version: 0.1.1
Summary: Python interface for Multi-Worm Tracker data
Home-page: https://github.org/nicktimko/multiworm
Author: Nick Timkovich
Author-email: npt@u.northwestern.edu
License: UNKNOWN
Keywords: c. elegans,caenorhabditis elegans,caenorhabditis,elegans,worm,tracking,biology,amaral
Platform: UNKNOWN
Classifier: Development Status :: 5 - Production/Stable
Classifier: Intended Audience :: Science/Research
Classifier: License :: OSI Approved :: MIT License
Classifier: Topic :: Scientific/Engineering :: Bio-Informatics
Requires-Dist: networkx (>=1.8.1)
Requires-Dist: numpy (>=1.8.1)
Requires-Dist: pandas (>=0.14.0)
Requires-Dist: pathlib (>=1.0.1)
Requires-Dist: six (>=1.7.2)

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Multiworm
=========

Reads data from the `Multi-Worm Tracker`_ (MWT) program by the Kerr Lab [Swierczek]_ and exposes it in a clean, easy-to-use interface. Used by `WALDO`_, a data-cleaner for the MWT developed by the Amaral Lab [Winter]_.

.. _WALDO: https://github.com/amarallab/waldo
.. _`Multi-Worm Tracker`: https://sourceforge.net/projects/mwt/
.. [Swierczek] NA Swierczek, AC Giles, CH Rankin, RA Kerr. (2011) "High-throughput behavioral analysis in *C. elegans*" *Nature Methods* doi:10.1038/nmeth.1625
.. [Winter] P Winter, RM Brielmann, N Timkovich, HT Navarro, A Teixeira-Castro, R Morimoto, LAN Amaral (accepted, pending publication) "A network approach to discerning the identities of *C. elegans* in a free moving population" *Scientific Reports*


