LICENSE
MANIFEST.in
README.md
pyproject.toml
src/cli.py
src/MtbTk.egg-info/PKG-INFO
src/MtbTk.egg-info/SOURCES.txt
src/MtbTk.egg-info/dependency_links.txt
src/MtbTk.egg-info/requires.txt
src/MtbTk.egg-info/top_level.txt
src/mtbtk/__init__.py
src/mtbtk/data/GO.json
src/mtbtk/data/KEGG_pathways.json
src/mtbtk/data/TF_genes.json
src/mtbtk/data/domains.json
src/mtbtk/data/epitopes.json
src/mtbtk/data/genes.json
src/mtbtk/data/lineage_info.json
src/mtbtk/tbgea/__init__.py
src/mtbtk/tbgea/config.py
src/mtbtk/tbgea/enrichment_analyzer.py
src/mtbtk/tbva/SNP_effect_annotator.py
src/mtbtk/tbva/__init__.py
src/mtbtk/tbva/annotator.py
src/mtbtk/tbva/config.py
src/mtbtk/tbva/lineage_identifier.py
src/mtbtk/tbva/vcf_parser.py