Metadata-Version: 2.1
Name: msprime
Version: 1.0.0a6
Summary: Simulate genealogical trees and genomic sequence data using population genetic models
Home-page: https://tskit.dev/msprime
Author: Tskit Developers
Author-email: admin@tskit.dev
License: GNU GPLv3+
Project-URL: Bug Tracker, https://github.com/tskit-dev/msprime/issues
Project-URL: Documentation, https://tskit.dev/msprime/docs/stable
Keywords: coalescent simulation,population genetics,ms,tree sequence,tskit
Platform: POSIX
Platform: Windows
Platform: MacOS X
Classifier: Programming Language :: C
Classifier: Programming Language :: Python
Classifier: Programming Language :: Python :: 3
Classifier: Programming Language :: Python :: 3.7
Classifier: Programming Language :: Python :: 3.8
Classifier: Programming Language :: Python :: 3.9
Classifier: Programming Language :: Python :: 3 :: Only
Classifier: Development Status :: 4 - Beta
Classifier: Environment :: Other Environment
Classifier: Intended Audience :: Science/Research
Classifier: License :: OSI Approved :: GNU General Public License v3 or later (GPLv3+)
Classifier: Operating System :: POSIX
Classifier: Operating System :: MacOS :: MacOS X
Classifier: Operating System :: Microsoft :: Windows
Classifier: Topic :: Scientific/Engineering
Classifier: Topic :: Scientific/Engineering :: Bio-Informatics
Requires-Python: >=3.7
Description-Content-Type: text/markdown
Requires-Dist: numpy
Requires-Dist: newick
Requires-Dist: tskit (>=0.3.3)

# msprime

[![Build Status](https://travis-ci.org/tskit-dev/msprime.svg?branch=main)](https://travis-ci.org/tskit-dev/msprime) [![Build status](https://ci.appveyor.com/api/projects/status/3d4rhxw6wxgm9snj/branch/main?svg=true)](https://ci.appveyor.com/project/tskit-dev/msprime/branch/main) [![CircleCI](https://circleci.com/gh/tskit-dev/msprime.svg?style=svg)](https://circleci.com/gh/tskit-dev/msprime) [![codecov](https://codecov.io/gh/tskit-dev/msprime/branch/main/graph/badge.svg)](https://codecov.io/gh/tskit-dev/msprime) [![Documentation Status](https://readthedocs.org/projects/msprime/badge/?version=stable)](https://msprime.readthedocs.io/en/stable/?badge=stable) [![PyPI Downloads](https://pepy.tech/badge/msprime)](https://pepy.tech/project/msprime) [![Conda Downloads](https://anaconda.org/conda-forge/msprime/badges/downloads.svg)](https://anaconda.org/conda-forge/msprime)

``msprime`` is a Python API and command line interface for simulating the 
coalescent with recombination based on [tskit](https://tskit.readthedocs.org/en/latest/).
Please see the [documentation](https://msprime.readthedocs.org/en/latest/)
for further information and 
[installation instructions](https://msprime.readthedocs.org/en/latest/installation.html).

If you would like to help make ``msprime`` better, please see the 
[developer documentation](https://msprime.readthedocs.org/en/latest/development.html)
to get started.

If you are looking for help on a specific issue or would like to ask a
question to fellow ``msprime`` users, please send an email to the
[mailing list](https://groups.google.com/group/msprime-users). By asking
questions on the mailing list, you can help to build a searchable knowledge
base.

We are currently working towards our 1.0 release, the roadmap of issues 
are in this [github milestone](https://github.com/tskit-dev/msprime/milestone/9).

If you use ``msprime`` in your work, please cite the [PLOS Computational
Biology](http://dx.doi.org/10.1371/journal.pcbi.1004842) paper.
See [here](https://msprime.readthedocs.org/en/latest/CITATION.html) for
full citation details.




