.travis.yml
LICENSE
MANIFEST.in
Makefile
README.rst
README.txt
_msprimemodule.c
dev.py
example.R
ez_setup.py
large-example.py
msp_dev.py
mspms_dev.py
requirements.txt
setup.py
stress_lowlevel.py
verification.py
data/ms/Makefile
data/ms/README
data/ms/ms.c
data/ms/ms.h
data/ms/rand1.c
data/ms/sample_stats.c
data/ms/streec.c
data/ms/tajd.c
docs/Makefile
docs/api.rst
docs/cli.rst
docs/conf.py
docs/examples.py
docs/file-format.rst
docs/index.rst
docs/introduction.rst
docs/tutorial.rst
docs/_build/.README
docs/_static/.README
docs/_static/mutations-tree-sequence-0.svg
docs/_static/mutations-tree-sequence-1.svg
docs/_static/simple-tree-sequence-0.svg
docs/_static/simple-tree-sequence-1.svg
docs/_static/simple-tree.svg
docs/_templates/.README
lib/Makefile
lib/avl.c
lib/avl.h
lib/dev.cfg
lib/err.h
lib/fenwick.c
lib/fenwick.h
lib/hapgen.c
lib/main.c
lib/msprime.c
lib/msprime.h
lib/newick.c
lib/object_heap.c
lib/object_heap.h
lib/test_fenwick.c
lib/tree_sequence.c
msprime/__init__.py
msprime/_version.py
msprime/cli.py
msprime/trees.py
msprime.egg-info/PKG-INFO
msprime.egg-info/SOURCES.txt
msprime.egg-info/dependency_links.txt
msprime.egg-info/entry_points.txt
msprime.egg-info/pbr.json
msprime.egg-info/requires.txt
msprime.egg-info/top_level.txt
tests/__init__.py
tests/test_cli.py
tests/test_highlevel.py
tests/test_lowlevel.py