numpy<3,>=1.25
pandas<3,>=1
pyarrow
pyteomics<5,>=3.5
sqlalchemy<3,>=1.4
click<9,>=7
xgboost<3,>=1.3
lxml>=4
rich>=13
pydantic>=2
werkzeug>=2
psm_utils>=1.0
ms2rescore-rs<2,>=0.4

[dev]
black
isort>5
pytest

[docs]
sphinx
numpydoc<2,>=1
recommonmark
toml
semver>=2
sphinx_rtd_theme
sphinx-autobuild
sphinx-automodapi
sphinx-click

[plotting]
matplotlib>=3.0
spectrum-utils>=0.4
