LICENSE
MANIFEST.in
README.md
pyproject.toml
setup.cfg
setup.py
src/ms_mint_app/__init__.py
src/ms_mint_app/_version.py
src/ms_mint_app/app.py
src/ms_mint_app/colors.py
src/ms_mint_app/duckdb_manager.py
src/ms_mint_app/instance.py
src/ms_mint_app/logging_setup.py
src/ms_mint_app/mass_calculator.py
src/ms_mint_app/peak_fitting.py
src/ms_mint_app/plugin_interface.py
src/ms_mint_app/plugin_manager.py
src/ms_mint_app/prebuild_cache.py
src/ms_mint_app/rt_span_optimizer.py
src/ms_mint_app/sample_metadata.py
src/ms_mint_app/tools.py
src/ms_mint_app/assets/MINT-logo.jpg
src/ms_mint_app/assets/antd-desktop.svg
src/ms_mint_app/assets/antd-home.svg
src/ms_mint_app/assets/antd-hourglass.svg
src/ms_mint_app/assets/antd-line-chart.svg
src/ms_mint_app/assets/antd-monitor.svg
src/ms_mint_app/assets/antd-unordered-list.svg
src/ms_mint_app/assets/dataSorted.js
src/ms_mint_app/assets/favicon.ico
src/ms_mint_app/assets/pi-stack.svg
src/ms_mint_app/assets/server_offline_notice.css
src/ms_mint_app/assets/server_offline_notice.js
src/ms_mint_app/assets/styles.css
src/ms_mint_app/assets/targets.css
src/ms_mint_app/assets/explore_bundle/chromatograms.parquet
src/ms_mint_app/assets/explore_bundle/manifest.json
src/ms_mint_app/assets/explore_bundle/results.parquet
src/ms_mint_app/assets/explore_bundle/samples.parquet
src/ms_mint_app/assets/explore_bundle/targets.parquet
src/ms_mint_app/plugins/__init__.py
src/ms_mint_app/plugins/download_utils.py
src/ms_mint_app/plugins/explorer.py
src/ms_mint_app/plugins/ms_files.py
src/ms_mint_app/plugins/processing.py
src/ms_mint_app/plugins/scalir.py
src/ms_mint_app/plugins/scalir_utils.py
src/ms_mint_app/plugins/target_optimization.py
src/ms_mint_app/plugins/targets.py
src/ms_mint_app/plugins/targets_asari.py
src/ms_mint_app/plugins/workspaces.py
src/ms_mint_app/plugins/analysis/__init__.py
src/ms_mint_app/plugins/analysis/_shared.py
src/ms_mint_app/plugins/analysis/bar.py
src/ms_mint_app/plugins/analysis/chromatogram_shared.py
src/ms_mint_app/plugins/analysis/clustermap.py
src/ms_mint_app/plugins/analysis/data_pipeline.py
src/ms_mint_app/plugins/analysis/feature_comparison.py
src/ms_mint_app/plugins/analysis/pca.py
src/ms_mint_app/plugins/analysis/plugin.py
src/ms_mint_app/plugins/analysis/qc.py
src/ms_mint_app/plugins/analysis/tsne.py
src/ms_mint_app/plugins/analysis/violin.py
src/ms_mint_app/plugins/analysis_tools/__init__.py
src/ms_mint_app/plugins/analysis_tools/trace_helper.py
src/ms_mint_app/scripts/Mint.py
src/ms_mint_app/scripts/__init__.py
src/ms_mint_app/tests/test_envelope_query.py
src/ms_mint_app2.egg-info/PKG-INFO
src/ms_mint_app2.egg-info/SOURCES.txt
src/ms_mint_app2.egg-info/dependency_links.txt
src/ms_mint_app2.egg-info/entry_points.txt
src/ms_mint_app2.egg-info/requires.txt
src/ms_mint_app2.egg-info/top_level.txt
tests/test_analysis_callbacks.py
tests/test_analysis_data_pipeline.py
tests/test_analysis_helpers.py
tests/test_analysis_layout.py
tests/test_analysis_lazy_import.py
tests/test_analysis_pca.py
tests/test_analysis_plugin.py
tests/test_app_layout.py
tests/test_app_utils.py
tests/test_bookmark_modal.py
tests/test_colors.py
tests/test_duckdb_manager_batches.py
tests/test_duckdb_manager_utils.py
tests/test_explorer_plugin.py
tests/test_file_formats.py
tests/test_import_database.py
tests/test_instance.py
tests/test_logging_setup.py
tests/test_metadata_handling.py
tests/test_mint_script_helpers.py
tests/test_mint_script_main.py
tests/test_ms_files_plugin.py
tests/test_mzml_writer.py
tests/test_parsers.py
tests/test_peak_fitting.py
tests/test_plugin_manager.py
tests/test_prebuild_cache.py
tests/test_processing_helpers.py
tests/test_processing_helpers_extended.py
tests/test_processing_plugin.py
tests/test_processing_results_actions.py
tests/test_processing_scalir_ui.py
tests/test_rt_alignment_state_authority.py
tests/test_rt_derivation.py
tests/test_rt_span_optimizer.py
tests/test_scalir_plugin.py
tests/test_scalir_utils.py
tests/test_target_optimization_helpers.py
tests/test_target_optimization_logic.py
tests/test_target_optimization_plugin.py
tests/test_target_optimization_tree.py
tests/test_targets_asari_plugin.py
tests/test_targets_plugin.py
tests/test_tools_helpers.py
tests/test_trace_helper.py
tests/test_workspaces_plugin.py