Metadata-Version: 2.1
Name: mrivis
Version: 0.3.8
Summary: Intuitive high-level classes for visualization of medical imaging data
Project-URL: Homepage, https://github.com/raamana/mrivis
Author-email: Pradeep Reddy Raamana <raamana@gmail.com>
License-Expression: Apache-2.0
License-File: AUTHORS.rst
License-File: LICENSE
Keywords: mrivis
Classifier: Development Status :: 2 - Pre-Alpha
Classifier: Intended Audience :: Developers
Classifier: License :: OSI Approved :: MIT License
Classifier: Natural Language :: English
Classifier: Programming Language :: Python :: 3.11
Requires-Dist: matplotlib
Requires-Dist: nibabel
Requires-Dist: numpy
Requires-Dist: scipy
Description-Content-Type: text/x-rst

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mrivis
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.. image:: http://joss.theoj.org/papers/10.21105/joss.00897/status.svg
   :target: https://doi.org/10.21105/joss.00897

.. image:: https://img.shields.io/pypi/v/mrivis.svg

.. image:: https://api.codacy.com/project/badge/Grade/370b1b78383b40b99eb15ae0490cfbdb
    :target: https://www.codacy.com/app/raamana/mrivis

.. image:: https://img.shields.io/badge/say-thanks-ff69b4.svg
        :target: https://saythanks.io/to/raamana


`mrivis` offers intuitive high-level classes for visualization of medical imaging data including:

 - advanced classes to easily develop customizable visualizations of 3D and 4D images, such as `Carpet()`, `SlicePicker()`, `Collage()` and the like
 - tools for comparison of spatial alignment of two 3D MRI scans (T1, T2, PET etc) using checkerboard plots and other comparison methods
 - additional helper, convenience and utility scripts related to visualization

Full documentation for both visualization classes and alignment check tools is available at https://raamana.github.io/mrivis/readme.html


A sample gallery of different ways to check alignment is shown below:

.. image:: docs/flyer_option_matrix.png



Full documentation https://raamana.github.io/mrivis/readme.html

Executable and interactive demo for the visualization classes:

.. image:: https://mybinder.org/badge.svg
    :target: https://mybinder.org/v2/gh/raamana/mrivis/master?filepath=docs%2Fexample_notebooks%2Fmrivis_demo_vis_classes.ipynb


**Installation**

.. code-block:: console

    $ pip install mrivis


If you would like to use the export to GIF from ``SlicePicker``, then install the ``imageio`` package as well via ``pip install imageio``


