README.md
setup.py
moonstone/__init__.py
moonstone/main.py
moonstone/version.py
moonstone.egg-info/PKG-INFO
moonstone.egg-info/SOURCES.txt
moonstone.egg-info/dependency_links.txt
moonstone.egg-info/entry_points.txt
moonstone.egg-info/requires.txt
moonstone.egg-info/top_level.txt
moonstone/analysis/__init__.py
moonstone/analysis/classify.py
moonstone/analysis/clustering.py
moonstone/analysis/columns_statistics.py
moonstone/analysis/differential_analysis.py
moonstone/analysis/randomForest.py
moonstone/analysis/regression.py
moonstone/analysis/statistical_test.py
moonstone/analysis/stats.py
moonstone/core/__init__.py
moonstone/core/module_base.py
moonstone/filtering/__init__.py
moonstone/filtering/base.py
moonstone/filtering/basics_filtering.py
moonstone/filtering/mean_filtering.py
moonstone/filtering/taxonomy_filtering.py
moonstone/normalization/__init__.py
moonstone/normalization/base.py
moonstone/normalization/counts/__init__.py
moonstone/normalization/counts/geometric_mean.py
moonstone/normalization/counts/random_selection.py
moonstone/normalization/counts/total_counts.py
moonstone/normalization/processed/__init__.py
moonstone/normalization/processed/base.py
moonstone/normalization/processed/scaling_normalization.py
moonstone/normalization/reads/__init__.py
moonstone/normalization/reads/base.py
moonstone/normalization/reads/downsize_dir.py
moonstone/normalization/reads/plot_placeholder.py
moonstone/normalization/reads/read_downsize.py
moonstone/parsers/DataAnalysisType.py
moonstone/parsers/__init__.py
moonstone/parsers/base.py
moonstone/parsers/handleCounts.py
moonstone/parsers/handleMetadata.py
moonstone/parsers/metadata.py
moonstone/parsers/counts/__init__.py
moonstone/parsers/counts/genes.py
moonstone/parsers/counts/picrust2.py
moonstone/parsers/counts/taxonomy/__init__.py
moonstone/parsers/counts/taxonomy/kraken2.py
moonstone/parsers/counts/taxonomy/metaphlan2.py
moonstone/parsers/counts/taxonomy/metaphlan3.py
moonstone/parsers/counts/taxonomy/qiime.py
moonstone/parsers/transform/__init__.py
moonstone/parsers/transform/base.py
moonstone/parsers/transform/cleaning.py
moonstone/plot/__init__.py
moonstone/plot/counts.py
moonstone/plot/metadata.py
moonstone/plot/graphs/__init__.py
moonstone/plot/graphs/bargraph.py
moonstone/plot/graphs/base.py
moonstone/plot/graphs/box.py
moonstone/plot/graphs/heatmap.py
moonstone/plot/graphs/histogram.py
moonstone/plot/graphs/scatter.py
moonstone/plot/graphs/violin.py
moonstone/transformers/__init__.py
moonstone/transformers/mergers/__init__.py
moonstone/transformers/mergers/counts_metadata.py
moonstone/utils/__init__.py
moonstone/utils/convert.py
moonstone/utils/df_merge.py
moonstone/utils/df_reindex.py
moonstone/utils/plot.py
moonstone/utils/print.py
moonstone/utils/taxonomy.py
moonstone/utils/pandas/__init__.py
moonstone/utils/pandas/series.py
tests/__init__.py
tests/analysis/__init__.py
tests/analysis/test_columns_statistics.py
tests/analysis/test_differential_analysis.py
tests/analysis/test_statistical_test.py
tests/analysis/test_stats.py
tests/filtering/__init__.py
tests/filtering/test_base.py
tests/filtering/test_basics_filtering.py
tests/filtering/test_mean_filtering.py
tests/filtering/test_taxonomy_filtering.py
tests/normalization/__init__.py
tests/normalization/counts/__init__.py
tests/normalization/counts/test_geometric_mean.py
tests/normalization/counts/test_random_selection.py
tests/normalization/counts/test_total_counts.py
tests/parsers/__init__.py
tests/parsers/test_base.py
tests/parsers/test_metadata.py
tests/parsers/counts/__init__.py
tests/parsers/counts/picrust2/__init__.py
tests/parsers/counts/picrust2/test_picrust2.py
tests/parsers/counts/taxonomy/__init__.py
tests/parsers/counts/taxonomy/test_base.py
tests/parsers/counts/taxonomy/kraken2/__init__.py
tests/parsers/counts/taxonomy/kraken2/test_kraken2.py
tests/parsers/counts/taxonomy/metaphlan2/__init__.py
tests/parsers/counts/taxonomy/metaphlan2/test_metaphlan2.py
tests/parsers/counts/taxonomy/metaphlan3/__init__.py
tests/parsers/counts/taxonomy/metaphlan3/test_metaphlan3.py
tests/parsers/counts/taxonomy/qiime/__init__.py
tests/parsers/counts/taxonomy/qiime/test_qiime.py
tests/parsers/transform/__init__.py
tests/parsers/transform/test_base.py
tests/parsers/transform/test_cleaning.py
tests/transformers/__init__.py
tests/transformers/test_counts_metadata.py
tests/utils/__init__.py
tests/utils/test_convert.py
tests/utils/test_df_merge.py
tests/utils/test_df_reindex.py
tests/utils/test_plot.py
tests/utils/test_print.py
tests/utils/pandas/__init__.py
tests/utils/pandas/test_series.py