torch>=1.7
numpy>=1.17

[all]
nibabel
scikit-image>=0.14.2
pillow
tensorboard
gdown>=4.4.0
pytorch-ignite==0.4.9
torchvision
itk>=5.2
tqdm>=4.47.0
lmdb
psutil
cucim>=21.8.2
openslide-python==1.1.2
tifffile
imagecodecs
pandas
einops
transformers
mlflow
matplotlib
tensorboardX
pyyaml
fire
jsonschema
pynrrd
pydicom

[cucim]
cucim>=21.8.2

[einops]
einops

[fire]
fire

[gdown]
gdown>=4.4.0

[ignite]
pytorch-ignite==0.4.9

[imagecodecs]
imagecodecs

[itk]
itk>=5.2

[jsonschema]
jsonschema

[lmdb]
lmdb

[matplotlib]
matplotlib

[mlflow]
mlflow

[nibabel]
nibabel

[openslide]
openslide-python==1.1.2

[pandas]
pandas

[pillow]
pillow!=8.3.0

[psutil]
psutil

[pydicom]
pydicom

[pynrrd]
pynrrd

[pyyaml]
pyyaml

[skimage]
scikit-image>=0.14.2

[tensorboard]
tensorboard

[tensorboardX]
tensorboardX

[tifffile]
tifffile

[torchvision]
torchvision

[tqdm]
tqdm>=4.47.0

[transformers]
transformers
