LICENSE
MANIFEST.in
README.rst
pyproject.toml
setup.py
ModelSEEDpy_freiburgermsu.egg-info/PKG-INFO
ModelSEEDpy_freiburgermsu.egg-info/SOURCES.txt
ModelSEEDpy_freiburgermsu.egg-info/dependency_links.txt
ModelSEEDpy_freiburgermsu.egg-info/requires.txt
ModelSEEDpy_freiburgermsu.egg-info/top_level.txt
modelseedpy_freiburgermsu/__init__.py
modelseedpy_freiburgermsu/config.cfg
modelseedpy_freiburgermsu/helpers.py
modelseedpy_freiburgermsu/biochem/__init__.py
modelseedpy_freiburgermsu/biochem/hierarchical_ontology.py
modelseedpy_freiburgermsu/biochem/modelseed_biochem.py
modelseedpy_freiburgermsu/biochem/modelseed_builder.py
modelseedpy_freiburgermsu/biochem/modelseed_compound.py
modelseedpy_freiburgermsu/biochem/modelseed_justification.py
modelseedpy_freiburgermsu/biochem/modelseed_reaction.py
modelseedpy_freiburgermsu/biochem/modelseed_to_cobra.py
modelseedpy_freiburgermsu/biochem/seed_object.py
modelseedpy_freiburgermsu/biochem/stoich_integration.py
modelseedpy_freiburgermsu/biochem/transporters.py
modelseedpy_freiburgermsu/biochem/utils.py
modelseedpy_freiburgermsu/community/__init__.py
modelseedpy_freiburgermsu/community/commhelper.py
modelseedpy_freiburgermsu/community/commphitting.py
modelseedpy_freiburgermsu/community/commscores.py
modelseedpy_freiburgermsu/community/commscores_template.html
modelseedpy_freiburgermsu/community/datastandardization.py
modelseedpy_freiburgermsu/community/metquest_code.py
modelseedpy_freiburgermsu/community/mscommunity.py
modelseedpy_freiburgermsu/community/mscompatibility.py
modelseedpy_freiburgermsu/community/mskineticsfba.py
modelseedpy_freiburgermsu/community/mssteadycom.py
modelseedpy_freiburgermsu/community/steadycom_template.html
modelseedpy_freiburgermsu/core/__init__.py
modelseedpy_freiburgermsu/core/biolog.py
modelseedpy_freiburgermsu/core/exceptions.py
modelseedpy_freiburgermsu/core/fba_template.html
modelseedpy_freiburgermsu/core/fbahelper.py
modelseedpy_freiburgermsu/core/gapfillinghelper.py
modelseedpy_freiburgermsu/core/msatpcorrection.py
modelseedpy_freiburgermsu/core/msbuilder.py
modelseedpy_freiburgermsu/core/mseditorapi.py
modelseedpy_freiburgermsu/core/msgapfill.py
modelseedpy_freiburgermsu/core/msgenome.py
modelseedpy_freiburgermsu/core/msgenomeclassifier.py
modelseedpy_freiburgermsu/core/msgrowthphenotypes.py
modelseedpy_freiburgermsu/core/msmedia.py
modelseedpy_freiburgermsu/core/msminimalmedia.py
modelseedpy_freiburgermsu/core/msmodel.py
modelseedpy_freiburgermsu/core/msmodelutl.py
modelseedpy_freiburgermsu/core/mstemplate.py
modelseedpy_freiburgermsu/core/optlanghelper.py
modelseedpy_freiburgermsu/core/rast_client.py
modelseedpy_freiburgermsu/core/report.py
modelseedpy_freiburgermsu/core/rpcclient.py
modelseedpy_freiburgermsu/core/template.py
modelseedpy_freiburgermsu/data/atp_medias.tsv
modelseedpy_freiburgermsu/data/compoundNames.json
modelseedpy_freiburgermsu/data/compound_Xrefs.json
modelseedpy_freiburgermsu/data/cpdNames.json
modelseedpy_freiburgermsu/data/categories/aminoAcids.npy
modelseedpy_freiburgermsu/data/categories/energy_compounds.npy
modelseedpy_freiburgermsu/data/categories/minerals.npy
modelseedpy_freiburgermsu/data/categories/sugars.npy
modelseedpy_freiburgermsu/data/categories/vitamins.npy
modelseedpy_freiburgermsu/data/templates/template_core.json
modelseedpy_freiburgermsu/fbapkg/__init__.py
modelseedpy_freiburgermsu/fbapkg/basefbapkg.py
modelseedpy_freiburgermsu/fbapkg/bilevelpkg.py
modelseedpy_freiburgermsu/fbapkg/changeoptpkg.py
modelseedpy_freiburgermsu/fbapkg/commkineticpkg.py
modelseedpy_freiburgermsu/fbapkg/drainfluxpkg.py
modelseedpy_freiburgermsu/fbapkg/elementuptakepkg.py
modelseedpy_freiburgermsu/fbapkg/expressionpkg.py
modelseedpy_freiburgermsu/fbapkg/flexiblebiomasspkg.py
modelseedpy_freiburgermsu/fbapkg/fluxfittingpkg.py
modelseedpy_freiburgermsu/fbapkg/fullthermopkg.py
modelseedpy_freiburgermsu/fbapkg/gapfillingpkg.py
modelseedpy_freiburgermsu/fbapkg/kbasemediapkg.py
modelseedpy_freiburgermsu/fbapkg/metabofbapkg.py
modelseedpy_freiburgermsu/fbapkg/mspackagemanager.py
modelseedpy_freiburgermsu/fbapkg/objconstpkg.py
modelseedpy_freiburgermsu/fbapkg/problemreplicationpkg.py
modelseedpy_freiburgermsu/fbapkg/proteomefittingpkg.py
modelseedpy_freiburgermsu/fbapkg/reactionusepkg.py
modelseedpy_freiburgermsu/fbapkg/revbinpkg.py
modelseedpy_freiburgermsu/fbapkg/simplethermopkg.py
modelseedpy_freiburgermsu/fbapkg/totalfluxpkg.py
modelseedpy_freiburgermsu/ml/__init__.py
modelseedpy_freiburgermsu/ml/build_classifier.py
modelseedpy_freiburgermsu/ml/predict_phenotype.py
modelseedpy_freiburgermsu/multiomics/__init__.py
modelseedpy_freiburgermsu/multiomics/msexpression.py
modelseedpy_freiburgermsu/test_data/__init__.py
modelseedpy_freiburgermsu/test_data/mock_data.py
tests/__init__.py
tests/test_advanced.py
tests/test_basic.py
tests/test_data/__init__.py
tests/test_data/mock_data.py
tests/test_data/mseditorapi_testing.py