.coveragerc
.gitignore
CONTRIBUTING.md
Dockerfile
LICENSE
MANIFEST.in
README.rst
azure-pipelines.yml
codecov.yml
docker-compose.yml
environment.yml
requirements.txt
requirements_doc.txt
requirements_testing.txt
setup.cfg
setup.py
.circleci/config.yml
.devcontainer/Dockerfile
.devcontainer/devcontainer.json
.devcontainer/noop.txt
.devcontainer/library-scripts/README.md
.devcontainer/library-scripts/common-debian.sh
.github/CODE_OF_CONDUCT.md
.github/PULL_REQUEST_TEMPLATE.md
.github/ISSUE_TEMPLATE/bug_report.md
.github/ISSUE_TEMPLATE/documentation.md
.github/ISSUE_TEMPLATE/feature_request.md
.github/workflows/CircleCI_PR.yml
.github/workflows/Docker_Release_Latest.yml
.github/workflows/Docker_Release_Tags.yml
.github/workflows/Docker_Tests.yml
.github/workflows/PyLint_PR.yml
.github/workflows/codeql.yml
.github/workflows/docker_tests.py
.github/workflows/ignore_words.txt
.github/workflows/linux_conda.yml
.github/workflows/linux_pip.yml
.github/workflows/macos_conda.yml
doc/Makefile
doc/api.rst
doc/changelog.rst
doc/conf.py
doc/docker.md
doc/index.html
doc/index.rst
doc/make.bat
doc/references-nirs.bib
doc/references.bib
doc/release.md
doc/_static/favicon.ico
doc/_static/font-awesome.css
doc/_static/mne_nirs_logo_small.svg
doc/_static/versions.json
doc/_static/css/project-template.css
doc/_static/fonts/fontawesome/fontawesome-webfont.eot
doc/_static/fonts/fontawesome/fontawesome-webfont.ttf
doc/_static/fonts/fontawesome/fontawesome-webfont.woff
doc/_static/fonts/fontawesome/fontawesome-webfont.woff2
doc/_static/js/copybutton.js
doc/_templates/layout.html
doc/_templates/autosummary/class.rst
doc/_templates/autosummary/function.rst
examples/README.txt
examples/general/README.txt
examples/general/plot_01_data_io.py
examples/general/plot_05_datasets.py
examples/general/plot_06_gowerlabs.py
examples/general/plot_10_hrf_simulation.py
examples/general/plot_11_hrf_measured.py
examples/general/plot_12_group_glm.py
examples/general/plot_13_fir_glm.py
examples/general/plot_14_glm_components.py
examples/general/plot_15_waveform.py
examples/general/plot_16_waveform_group.py
examples/general/plot_19_snirf.py
examples/general/plot_20_enhance.py
examples/general/plot_21_artifacts.py
examples/general/plot_22_quality.py
examples/general/plot_30_frequency.py
examples/general/plot_40_mayer.py
examples/general/plot_50_decoding.py
examples/general/plot_60_aux_data.py
examples/general/plot_70_visualise_brain.py
examples/general/plot_80_save_read_glm.py
examples/general/plot_99_bad.py
examples/migration/README.txt
examples/migration/plot_01_homer.py
examples/migration/plot_02_nirstoolbox.py
mne_nirs/__init__.py
mne_nirs/_version.py
mne_nirs/conftest.py
mne_nirs/fixes.py
mne_nirs.egg-info/PKG-INFO
mne_nirs.egg-info/SOURCES.txt
mne_nirs.egg-info/dependency_links.txt
mne_nirs.egg-info/not-zip-safe
mne_nirs.egg-info/requires.txt
mne_nirs.egg-info/top_level.txt
mne_nirs/channels/__init__.py
mne_nirs/channels/_channels.py
mne_nirs/channels/_roi.py
mne_nirs/channels/_short.py
mne_nirs/channels/tests/__init__.py
mne_nirs/channels/tests/test_channels.py
mne_nirs/channels/tests/test_roi.py
mne_nirs/channels/tests/test_short.py
mne_nirs/datasets/__init__.py
mne_nirs/datasets/audio_or_visual_speech/__init__.py
mne_nirs/datasets/audio_or_visual_speech/_audio_or_visual_speech.py
mne_nirs/datasets/audio_or_visual_speech/tests/__init__.py
mne_nirs/datasets/audio_or_visual_speech/tests/test_dataset_avspeech.py
mne_nirs/datasets/block_speech_noise/__init__.py
mne_nirs/datasets/block_speech_noise/_block_speech_noise.py
mne_nirs/datasets/block_speech_noise/tests/__init__.py
mne_nirs/datasets/block_speech_noise/tests/test_dataset_block.py
mne_nirs/datasets/fnirs_motor_group/__init__.py
mne_nirs/datasets/fnirs_motor_group/fnirs_motor_group.py
mne_nirs/datasets/fnirs_motor_group/tests/__init__.py
mne_nirs/datasets/fnirs_motor_group/tests/test_dataset_tap.py
mne_nirs/datasets/snirf_with_aux/__init__.py
mne_nirs/datasets/snirf_with_aux/snirf_with_aux.py
mne_nirs/datasets/snirf_with_aux/tests/__init__.py
mne_nirs/datasets/snirf_with_aux/tests/test_dataset_aux.py
mne_nirs/experimental_design/__init__.py
mne_nirs/experimental_design/_experimental_design.py
mne_nirs/experimental_design/tests/__init__.py
mne_nirs/experimental_design/tests/test_experimental_design.py
mne_nirs/io/__init__.py
mne_nirs/io/fold/__init__.py
mne_nirs/io/fold/_fold.py
mne_nirs/io/fold/tests/__init__.py
mne_nirs/io/fold/tests/test_fold.py
mne_nirs/io/fold/tests/data/example.xls
mne_nirs/io/snirf/__init__.py
mne_nirs/io/snirf/_aux.py
mne_nirs/io/snirf/_snirf.py
mne_nirs/io/snirf/tests/__init__.py
mne_nirs/io/snirf/tests/test_snirf.py
mne_nirs/preprocessing/__init__.py
mne_nirs/preprocessing/_mayer.py
mne_nirs/preprocessing/_peak_power.py
mne_nirs/preprocessing/_scalp_coupling_segmented.py
mne_nirs/preprocessing/tests/__init__.py
mne_nirs/preprocessing/tests/test_mayer.py
mne_nirs/preprocessing/tests/test_quality.py
mne_nirs/signal_enhancement/__init__.py
mne_nirs/signal_enhancement/_negative_correlation.py
mne_nirs/signal_enhancement/_short_channel_correction.py
mne_nirs/signal_enhancement/tests/__init__.py
mne_nirs/signal_enhancement/tests/test_negative_correlation.py
mne_nirs/signal_enhancement/tests/test_short_channels.py
mne_nirs/simulation/__init__.py
mne_nirs/simulation/_simulation.py
mne_nirs/simulation/tests/__init__.py
mne_nirs/simulation/tests/test_simulation.py
mne_nirs/statistics/__init__.py
mne_nirs/statistics/_glm_level_first.py
mne_nirs/statistics/_roi.py
mne_nirs/statistics/_statsmodels.py
mne_nirs/statistics/tests/__init__.py
mne_nirs/statistics/tests/test_glm_type.py
mne_nirs/statistics/tests/test_statistics.py
mne_nirs/statistics/tests/test_statsmodels.py
mne_nirs/tests/__init__.py
mne_nirs/tests/test_examples.py
mne_nirs/tests/test_version.py
mne_nirs/utils/__init__.py
mne_nirs/utils/_io.py
mne_nirs/utils/tests/__init__.py
mne_nirs/utils/tests/test_io.py
mne_nirs/visualisation/__init__.py
mne_nirs/visualisation/_plot_3d_montage.py
mne_nirs/visualisation/_plot_GLM_surface_projection.py
mne_nirs/visualisation/_plot_GLM_topo.py
mne_nirs/visualisation/_plot_nirs_source_detector.py
mne_nirs/visualisation/_plot_quality_metrics.py
mne_nirs/visualisation/tests/__init__.py
mne_nirs/visualisation/tests/test_quality.py
mne_nirs/visualisation/tests/test_visualisation.py
tools/circleci_dependencies.sh
tools/fold.sh
tools/get_minimal_commands.sh
tools/github_actions_dependencies.sh
tools/github_actions_download.sh
tools/github_actions_infos.sh
tools/github_actions_install.sh
tools/github_actions_locale.sh
tools/github_actions_test.sh
tools/setup_xvfb.sh