from .config import (ATOM_DECODER, CONTEXT_NORMS, DIMENSION, MAX_N_NODES,
                     MIN_N_NODES, NUM_BOND_TYPES)
from .mol_utils import (apply_transform, coord_to_pf_batched,
                        get_context_shape, ifm_get_xh_from_fragment,
                        ifm_prepare_fragments_for_merge,
                        ifm_prepare_gen_fragment_context,
                        inverse_coord_transform, prepare_adj_mat_seer_input,
                        prepare_edm_input, prepare_fragment, redefine_bonds,
                        samples_to_rdkit_mol, set_conformer_positions)
from .onnx_utils import (coord_to_pf_batched_onnx, get_context_shape_onnx,
                         ifm_get_xh_from_fragment_onnx,
                         ifm_prepare_fragments_for_merge_onnx,
                         ifm_prepare_gen_fragment_context_onnx,
                         inverse_coord_transform_onnx,
                         prepare_adj_mat_seer_input_onnx,
                         prepare_edm_input_onnx, prepare_fragment_onnx,
                         redefine_bonds_onnx, samples_to_rdkit_mol_onnx)
from .standardizer import standardize_mol

__all__ = [
    "samples_to_rdkit_mol",
    "samples_to_rdkit_mol_onnx",
    "set_conformer_positions",
    "apply_transform",
    "coord_to_pf_batched",
    "coord_to_pf_batched_onnx",
    "get_context_shape",
    "get_context_shape_onnx",
    "prepare_adj_mat_seer_input",
    "prepare_adj_mat_seer_input_onnx",
    "prepare_edm_input",
    "prepare_edm_input_onnx",
    "prepare_fragment",
    "prepare_fragment_onnx",
    "ifm_prepare_gen_fragment_context",
    "ifm_prepare_gen_fragment_context_onnx",
    "ifm_prepare_fragments_for_merge",
    "ifm_prepare_fragments_for_merge_onnx",
    "ifm_get_xh_from_fragment",
    "ifm_get_xh_from_fragment_onnx",
    "inverse_coord_transform",
    "inverse_coord_transform_onnx",
    "redefine_bonds",
    "redefine_bonds_onnx",
    "standardize_mol",
    "DIMENSION",
    "NUM_BOND_TYPES",
    "MIN_N_NODES",
    "MAX_N_NODES",
    "CONTEXT_NORMS",
    "ATOM_DECODER",
]
