.env.example
.env.test
.flake8
BEGINNER_GUIDE.md
CLAUDE.md
EXAMPLE_EXPERIMENT.md
LICENSE
MANIFEST.in
README.md
ROADMAP.md
Reasoning_LLM.ipynb
config.txt
pyproject.toml
requirements.txt
script_architecture.md
setup.sh
uv.lock
.github/workflows/publish.yml
documentation/CLI_Testing_Guide.md
documentation/ADR/200821_Output_Parser.md
documentation/phases/phase_1.md
documentation/phases/phase_10.md
documentation/phases/phase_11.md
documentation/phases/phase_1_handover.md
documentation/phases/phase_2_handover.md
documentation/phases/phase_3.md
documentation/phases/phase_3_handover.md
documentation/phases/phase_4.md
documentation/phases/phase_4_close_out.md
documentation/phases/phase_4_completion_summary.md
documentation/phases/phase_4_handover.md
documentation/phases/phase_5.md
documentation/phases/phase_6.md
documentation/phases/phase_7.md
documentation/phases/phase_8.md
documentation/phases/phase_9.md
documentation/phases/phase_9a.md
examples/README.md
examples/configs/advanced_reasoning.yaml
examples/configs/comparison_study.yaml
examples/configs/single_experiment.yaml
examples/scripts/batch_experiments.sh
scripts/install-sqlite-mcp-server.sh
src/ml_agents/__init__.py
src/ml_agents/config.py
src/ml_agents/cli/__init__.py
src/ml_agents/cli/config_loader.py
src/ml_agents/cli/display.py
src/ml_agents/cli/main.py
src/ml_agents/cli/validators.py
src/ml_agents/cli/commands/__init__.py
src/ml_agents/cli/commands/db.py
src/ml_agents/cli/commands/eval.py
src/ml_agents/cli/commands/preprocess.py
src/ml_agents/cli/commands/results.py
src/ml_agents/cli/commands/setup.py
src/ml_agents/core/__init__.py
src/ml_agents/core/database_manager.py
src/ml_agents/core/dataset_loader.py
src/ml_agents/core/dataset_preprocessor.py
src/ml_agents/core/dataset_uploader.py
src/ml_agents/core/experiment_runner.py
src/ml_agents/core/reasoning_inference.py
src/ml_agents/core/results_processor.py
src/ml_agents/reasoning/__init__.py
src/ml_agents/reasoning/base.py
src/ml_agents/reasoning/chain_of_thought.py
src/ml_agents/reasoning/chain_of_verification.py
src/ml_agents/reasoning/none.py
src/ml_agents/reasoning/program_of_thought.py
src/ml_agents/reasoning/reasoning_as_planning.py
src/ml_agents/reasoning/reflection.py
src/ml_agents/reasoning/skeleton_of_thought.py
src/ml_agents/reasoning/tree_of_thought.py
src/ml_agents/reasoning/prompts/base.txt
src/ml_agents/reasoning/prompts/chain_of_thought.txt
src/ml_agents/reasoning/prompts/chain_of_verification.txt
src/ml_agents/reasoning/prompts/program_of_thought.txt
src/ml_agents/reasoning/prompts/reasoning_as_planning.txt
src/ml_agents/reasoning/prompts/reflection.txt
src/ml_agents/reasoning/prompts/skeleton_of_thought.txt
src/ml_agents/reasoning/prompts/tree_of_thought.txt
src/ml_agents/utils/__init__.py
src/ml_agents/utils/answer_extraction.py
src/ml_agents/utils/api_clients.py
src/ml_agents/utils/env_validator.py
src/ml_agents/utils/logging_config.py
src/ml_agents/utils/output_parser.py
src/ml_agents/utils/rate_limiter.py
src/ml_agents_reasoning.egg-info/PKG-INFO
src/ml_agents_reasoning.egg-info/SOURCES.txt
src/ml_agents_reasoning.egg-info/dependency_links.txt
src/ml_agents_reasoning.egg-info/entry_points.txt
src/ml_agents_reasoning.egg-info/requires.txt
src/ml_agents_reasoning.egg-info/top_level.txt