LICENSE.txt
README.md
setup.py
mitylib/__init__.py
mitylib/_version.py
mitylib/call.py
mitylib/commands.py
mitylib/merge.py
mitylib/mity
mitylib/normalise.py
mitylib/report.py
mitylib/util.py
mitylib/annot_chrm/chrm_anticodon_positions.bed.gz
mitylib/annot_chrm/chrm_anticodon_positions.bed.gz.tbi
mitylib/annot_chrm/chrm_gtf_annotations.bed.gz
mitylib/annot_chrm/chrm_gtf_annotations.bed.gz.tbi
mitylib/annot_chrm/chrm_haplotype_data.vcf.gz
mitylib/annot_chrm/chrm_haplotype_data.vcf.gz.tbi
mitylib/annot_chrm/chrm_mgrb_variants.vcf.gz
mitylib/annot_chrm/chrm_mgrb_variants.vcf.gz.tbi
mitylib/annot_chrm/chrm_mito_dna_func_loc.bed.gz
mitylib/annot_chrm/chrm_mito_dna_func_loc.bed.gz.tbi
mitylib/annot_chrm/chrm_mitomap_panel_annotations.vcf.gz
mitylib/annot_chrm/chrm_mitomap_panel_annotations.vcf.gz.tbi
mitylib/annot_chrm/chrm_mitotip_score_fixed_del.vcf.gz
mitylib/annot_chrm/chrm_mitotip_score_fixed_del.vcf.gz.tbi
mitylib/annot_mt/anticodon_positions.bed.gz
mitylib/annot_mt/anticodon_positions.bed.gz.tbi
mitylib/annot_mt/gtf_annotations.bed.gz
mitylib/annot_mt/gtf_annotations.bed.gz.tbi
mitylib/annot_mt/haplotype_data.vcf.gz
mitylib/annot_mt/haplotype_data.vcf.gz.tbi
mitylib/annot_mt/mgrb_variants.vcf.gz
mitylib/annot_mt/mgrb_variants.vcf.gz.tbi
mitylib/annot_mt/mito_dna_func_loc.bed.gz
mitylib/annot_mt/mito_dna_func_loc.bed.gz.tbi
mitylib/annot_mt/mitomap_panel_annotations.vcf.gz
mitylib/annot_mt/mitomap_panel_annotations.vcf.gz.tbi
mitylib/annot_mt/mitotip_score_fixed_del.vcf.gz
mitylib/annot_mt/mitotip_score_fixed_del.vcf.gz.tbi
mitylib/config/report-config.yaml
mitylib/config/vcfanno-config-chrm.toml
mitylib/config/vcfanno-config-mt.toml
mitylib/reference/hg19.chrM.fa
mitylib/reference/hg19.chrM.fa.fai
mitylib/reference/hg19.dict
mitylib/reference/hg19.genome
mitylib/reference/hg38.chrM.fa
mitylib/reference/hg38.chrM.fa.fai
mitylib/reference/hg38.dict
mitylib/reference/hg38.genome
mitylib/reference/hs37d5.MT.fa
mitylib/reference/hs37d5.MT.fa.fai
mitylib/reference/hs37d5.dict
mitylib/reference/hs37d5.genome
mitylib/reference/mm10.chrM.fa
mitylib/reference/mm10.chrM.fa.fai
mitylib/reference/mm10.genome
mitywgs.egg-info/PKG-INFO
mitywgs.egg-info/SOURCES.txt
mitywgs.egg-info/dependency_links.txt
mitywgs.egg-info/requires.txt
mitywgs.egg-info/top_level.txt