LICENSE.md
MANIFEST.in
README.rst
pyproject.toml
setup.py
mimeco/__init__.py
mimeco/analysis.py
mimeco/enterocyte_specific_utils.py
mimeco/sandbox.py
mimeco/toy_example.py
mimeco/utils.py
mimeco.egg-info/PKG-INFO
mimeco.egg-info/SOURCES.txt
mimeco.egg-info/dependency_links.txt
mimeco.egg-info/requires.txt
mimeco.egg-info/top_level.txt
mimeco/__pycache__/__init__.cpython-37.pyc
mimeco/__pycache__/enterocyte_specific_utils.cpython-37.pyc
mimeco/__pycache__/mimeco.cpython-37.pyc
mimeco/__pycache__/utils.cpython-37.pyc
mimeco/resources/AAD_BiGG.tsv
mimeco/resources/AAD_VMH.tsv
mimeco/resources/MIMEco_logo.png
mimeco/resources/Western_diet_BiGG.csv
mimeco/resources/Western_diet_VMH.csv
mimeco/resources/blood_reactions_id_enterocyte.csv
mimeco/resources/enterocyte_BiGG.xml
mimeco/resources/enterocyte_VMH.xml
mimeco/resources/enterocyte_VMH_v2.xml
mimeco/resources/enterocyte_VMH_v3.xml
tests/test_mimeco.py
tests/resources/Akkermansia_muciniphila_ATCC_BAA_835.xml
tests/resources/Bifidobacterium_adolescentis_ATCC_15703_AGORA2.mat
tests/resources/Bifidobacterium_adolescentis_ATCC_15703_BiGG.xml
tests/resources/Lactobacillus_plantarum_WCFS1.xml
tests/resources/Lactobacillus_plantarum_WCFS1_Akkermansia_muciniphila_ATCC_BAA_835_WD_PC_interaction_score.pickle
tests/resources/Lactobacillus_plantarum_WCFS1_Akkermansia_muciniphila_ATCC_BAA_835_WD_PC_interaction_type.pickle
tests/resources/Lactobacillus_plantarum_WCFS1_Akkermansia_muciniphila_ATCC_BAA_835_WD_PC_medium_dict.pickle
tests/resources/Lactobacillus_plantarum_WCFS1_Akkermansia_muciniphila_ATCC_BAA_835_WD_PC_potential_exchange.pickle
tests/resources/Western_diet.pickle