.gitignore
.mlc-config.json
CITATION.cff
CODE_OF_CONDUCT.md
CONTRIBUTING.md
LICENSE
README.dev.md
README.md
mkdocs.yml
pyproject.toml
sonar-project.properties
.githooks/pre-commit
.github/workflows/build.yml
.github/workflows/cffconvert.yml
.github/workflows/documentation-deploy.yml
.github/workflows/documentation-test.yml
.github/workflows/markdown-link-check.yml
.github/workflows/publish.yml
.github/workflows/sonarcloud.yml
docs/index.md
docs/assets/custom.css
docs/assets/fontawesome.min.js
docs/assets/icon.png
docs/assets/logo.png
docs/assets/mathjax.js
docs/assets/solid.min.js
docs/background/bioscreen.md
docs/development/development.md
docs/introduction/introduction.md
docs/reference/reference_analysis.md
docs/reference/reference_data.md
docs/reference/reference_transport.md
docs/reference/reference_visualize.md
examples/additional_term.ipynb
examples/example_equation_formulation.ipynb
examples/example_exact_equation.ipynb
examples/example_mibitrans_anatrans_comparison.ipynb
examples/example_walkthrough.ipynb
mibitrans/__init__.py
mibitrans.egg-info/PKG-INFO
mibitrans.egg-info/SOURCES.txt
mibitrans.egg-info/dependency_links.txt
mibitrans.egg-info/requires.txt
mibitrans.egg-info/top_level.txt
mibitrans/analysis/__init__.py
mibitrans/analysis/mass_balance.py
mibitrans/analysis/parameter_calculations.py
mibitrans/data/__init__.py
mibitrans/data/check_input.py
mibitrans/data/parameter_information.py
mibitrans/data/parameters.py
mibitrans/transport/__init__.py
mibitrans/transport/model_parent.py
mibitrans/transport/models.py
mibitrans/visualize/__init__.py
mibitrans/visualize/animation.py
mibitrans/visualize/plot_line.py
mibitrans/visualize/plot_surface.py
mibitrans/visualize/show_conditions.py
tests/__init__.py
tests/conftest.py
tests/test_anatrans.py
tests/test_bioscreen.py
tests/test_example_data.py
tests/test_mass_balance.py
tests/test_mibitrans.py
tests/test_parameters.py
tests/test_transport_3d.py
tests/test_visualization.py