MANIFEST.in
README.md
setup.py
mhcnuggets/README.md
mhcnuggets/__init__.py
mhcnuggets/user_guide.ipynb
mhcnuggets.egg-info/PKG-INFO
mhcnuggets.egg-info/SOURCES.txt
mhcnuggets.egg-info/dependency_links.txt
mhcnuggets.egg-info/requires.txt
mhcnuggets.egg-info/top_level.txt
mhcnuggets.egg-info/zip-safe
mhcnuggets/data/__init__.py
mhcnuggets/data/production/__init__.py
mhcnuggets/data/production/examples_per_allele.pkl
mhcnuggets/data/production/mhcI/__init__.py
mhcnuggets/data/production/mhcI/alleles_with_trained_models.txt
mhcnuggets/data/production/mhcI/curated_training_data.csv
mhcnuggets/data/production/mhcI/mhc_tuning.csv
mhcnuggets/data/production/mhcII/__init__.py
mhcnuggets/data/production/mhcII/alleles_with_trained_models.txt
mhcnuggets/data/production/mhcII/curated_training_data.csv
mhcnuggets/data/production/mhcII/mhc_tuning.csv
mhcnuggets/data/test/__init__.py
mhcnuggets/data/test/test_peptides.peps
mhcnuggets/saves/__init__.py
mhcnuggets/saves/production/BoLA-212:01_BA.h5
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mhcnuggets/saves/test/HLA-A01:01_test_model.h5
mhcnuggets/saves/test/HLA-A01:01_test_model.predictions
mhcnuggets/saves/test/__init__.py
mhcnuggets/src/__init__.py
mhcnuggets/src/aa_embeddings.py
mhcnuggets/src/calculate_mhc_relations.py
mhcnuggets/src/dataset.py
mhcnuggets/src/evaluate.py
mhcnuggets/src/evaluate_all.py
mhcnuggets/src/find_closest_mhcI.py
mhcnuggets/src/find_closest_mhcII.py
mhcnuggets/src/models.py
mhcnuggets/src/predict.py
mhcnuggets/src/supertypes.py
mhcnuggets/src/train.py