LICENSE
MANIFEST.in
README.md
README.rst
setup.cfg
setup.py
docs/Makefile
docs/conf.py
docs/index.rst
docs/make.bat
docs/mewpy-arch.png
docs/mewpy.io.rst
docs/mewpy.model.data.rst
docs/mewpy.model.rst
docs/mewpy.optimization.inspyred.rst
docs/mewpy.optimization.jmetal.rst
docs/mewpy.optimization.rst
docs/mewpy.problems.rst
docs/mewpy.regulation.rst
docs/mewpy.rst
docs/mewpy.simulation.rst
docs/mewpy.unittests.rst
docs/mewpy.utils.rst
docs/mewpy.visualization.rst
docs/modules.rst
docs/build/html/_images/mewpy-arch.png
docs/build/html/_static/file.png
docs/build/html/_static/minus.png
docs/build/html/_static/plus.png
src/mewpy/__init__.py
src/mewpy.egg-info/PKG-INFO
src/mewpy.egg-info/SOURCES.txt
src/mewpy.egg-info/dependency_links.txt
src/mewpy.egg-info/not-zip-safe
src/mewpy.egg-info/requires.txt
src/mewpy.egg-info/top_level.txt
src/mewpy/io/__init__.py
src/mewpy/io/bnet.py
src/mewpy/io/sbml.py
src/mewpy/io/sbml_qual.py
src/mewpy/io/tabular.py
src/mewpy/model/__init__.py
src/mewpy/model/gecko.py
src/mewpy/model/kinetic.py
src/mewpy/model/smoment.py
src/mewpy/model/data/__init__.py
src/mewpy/optimization/__init__.py
src/mewpy/optimization/ea.py
src/mewpy/optimization/evaluation.py
src/mewpy/optimization/inspyred/__init__.py
src/mewpy/optimization/inspyred/ea.py
src/mewpy/optimization/inspyred/observers.py
src/mewpy/optimization/inspyred/operators.py
src/mewpy/optimization/inspyred/problem.py
src/mewpy/optimization/jmetal/__init__.py
src/mewpy/optimization/jmetal/ea.py
src/mewpy/optimization/jmetal/observers.py
src/mewpy/optimization/jmetal/operators.py
src/mewpy/optimization/jmetal/problem.py
src/mewpy/problems/__init__.py
src/mewpy/problems/gecko.py
src/mewpy/problems/genes.py
src/mewpy/problems/kinetic.py
src/mewpy/problems/problem.py
src/mewpy/problems/reactions.py
src/mewpy/regulation/RFBA.py
src/mewpy/regulation/SRFBA.py
src/mewpy/regulation/__init__.py
src/mewpy/regulation/integrated_model.py
src/mewpy/regulation/optorf.py
src/mewpy/regulation/optram.py
src/mewpy/regulation/regulatory_interaction.py
src/mewpy/regulation/regulatory_model.py
src/mewpy/regulation/regulatory_variable.py
src/mewpy/regulation/variable.py
src/mewpy/simulation/__init__.py
src/mewpy/simulation/cobra.py
src/mewpy/simulation/kinetic.py
src/mewpy/simulation/reframed.py
src/mewpy/simulation/simulation.py
src/mewpy/unittests/__init__.py
src/mewpy/unittests/cobra_geckoopt.py
src/mewpy/unittests/eacomparison.py
src/mewpy/unittests/geckoopt.py
src/mewpy/unittests/geckosimulation.py
src/mewpy/unittests/geneopt.py
src/mewpy/unittests/geneoulevel.py
src/mewpy/unittests/gpr_eval.py
src/mewpy/unittests/kinetic.py
src/mewpy/unittests/load.py
src/mewpy/unittests/opt.py
src/mewpy/unittests/optorf.py
src/mewpy/unittests/optram.py
src/mewpy/unittests/rfba.py
src/mewpy/unittests/smoment.py
src/mewpy/unittests/srfba.py
src/mewpy/utils/__init__.py
src/mewpy/utils/constants.py
src/mewpy/utils/crossmodel.py
src/mewpy/utils/ode.py
src/mewpy/utils/parsing.py
src/mewpy/utils/process.py
src/mewpy/utils/utilities.py
src/mewpy/visualization/__init__.py
src/mewpy/visualization/envelope.py
src/mewpy/visualization/escher.py
src/mewpy/visualization/plot.py