LICENSE
MANIFEST.in
README.md
requirements.txt
setup.py
metient/__init__.py
metient/metient.py
metient.egg-info/PKG-INFO
metient.egg-info/SOURCES.txt
metient.egg-info/dependency_links.txt
metient.egg-info/requires.txt
metient.egg-info/top_level.txt
metient/lib/__init__.py
metient/lib/migration_history_inference.py
metient/lib/polytomy_resolver.py
metient/lib/projection.py
metient/lib/u_optimizer.py
metient/lib/v_optimizer.py
metient/lib/projectppm/.gitignore
metient/lib/projectppm/InputDataExample
metient/lib/projectppm/README.md
metient/lib/projectppm/main.c
metient/lib/projectppm/make.sh
metient/lib/projectppm/project_onto_PPM.c
metient/lib/projectppm/project_onto_PPM.h
metient/lib/projectppm/test_against_CVX_matlab.m
metient/lib/projectppm/pic/cflow0.png
metient/util/__init__.py
metient/util/create_conf_intervals_from_reads.py
metient/util/data_extraction_util.py
metient/util/deprecated.py
metient/util/eval_util.py
metient/util/globals.py
metient/util/optimal_subtrees.py
metient/util/pairtree_data_extraction_util.py
metient/util/plotting_util.py
metient/util/vertex_labeling_util.py